DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nnk and crol

DIOPT Version :10

Sequence 1:NP_650659.2 Gene:Nnk / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster


Alignment Length:211 Identity:62/211 - (29%)
Similarity:91/211 - (43%) Gaps:49/211 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 RKYTKRSSPKNDDTDFLKPAKKKRKTYIS-------QKVHICDHCGKKFTDKGNFNLHVLRHSGV 305
            ||:|..:..:   .|..|.:..:::.|::       |..|.||.||||:|.|.:...|:..|:..
  Fly   353 RKHTGETPHR---CDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNE 414

  Fly   306 KPFECPECGQ---------------------------KEFNR--YILNIHIRVKHRGEKPYACQF 341
            .||.|..||:                           |.|.|  ::|| |:| :|.||.|:.|.:
  Fly   415 TPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLN-HVR-QHTGESPHRCSY 477

  Fly   342 CDERFVHSTMRSRHENRVHRNK-KTPKNFKCNYCDKRYESNYQRAKHEVVHTGERNFHCEVCKVS 405
            |.:.|   |.:....|.:.::. :||  |||.||.|.:........|...||||....|..|..:
  Fly   478 CMKTF---TRKEHLVNHIRQHTGETP--FKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKT 537

  Fly   406 FTRNSNLKTHYRSRQH 421
            |||..:|..|.  |||
  Fly   538 FTRKEHLTNHV--RQH 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NnkNP_650659.2 zf-AD 4..74 CDD:214871
C2H2 Zn finger 282..302 CDD:275368 9/19 (47%)
C2H2 Zn finger 310..331 CDD:275368 10/49 (20%)
C2H2 Zn finger 339..360 CDD:275368 5/20 (25%)
C2H2 Zn finger 371..388 CDD:275370 4/16 (25%)
zf-met 397..421 CDD:463736 8/23 (35%)
C2H2 Zn finger 399..417 CDD:275368 7/17 (41%)
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 62/211 (29%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368 1/1 (100%)
C2H2 Zn finger 363..383 CDD:275368 3/19 (16%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
C2H2 Zn finger 419..439 CDD:275368 3/19 (16%)
C2H2 Zn finger 447..467 CDD:275368 7/21 (33%)
C2H2 Zn finger 475..495 CDD:275368 5/22 (23%)
C2H2 Zn finger 503..523 CDD:275368 5/19 (26%)
C2H2 Zn finger 531..551 CDD:275368 8/21 (38%)
C2H2 Zn finger 559..579 CDD:275368
C2H2 Zn finger 587..607 CDD:275368
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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