DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nnk and si:ch211-276c2.4

DIOPT Version :10

Sequence 1:NP_650659.2 Gene:Nnk / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_002664740.1 Gene:si:ch211-276c2.4 / 321704 ZFINID:ZDB-GENE-030131-423 Length:394 Species:Danio rerio


Alignment Length:391 Identity:96/391 - (24%)
Similarity:145/391 - (37%) Gaps:137/391 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 EIPFSKEDDEQEQQQEYEDMVDKKTGHDDGEESQECEESQPDEE--ESQQNEEDEEESQEDDDEL 213
            |:.....:.||....:.||:                 |.|.|:|  |.:.:||||:|.::|||: 
Zfish     5 EVEIDLSELEQSTVSDEEDI-----------------EEQADQELNEDEDDEEDEDEDEDDDDD- 51

  Fly   214 WQNEDGDSDTDADSMSDIEATSRQSAL-----------------------DEDKKP------RRK 249
             .::|.|.|.|.|.....:.|.:.|..                       ...:||      .:.
Zfish    52 -DDDDDDEDEDEDEYYKSKKTPKTSKTLHTCSQCGKNYKHISSLRIHLLSHTGEKPFHCDQCEKT 115

  Fly   250 YTKRSSPK-NDDTDF----------------LKPAKKKRKTYISQKVHICDHCGKKFTDKGNFNL 297
            |:..|..| :....|                |...|:.:||:...:.|:|..|||.||.......
Zfish   116 YSTLSGLKIHQVVHFSERPYSCSVCGRSFSRLDSCKQHQKTHDKVRDHVCTECGKSFTTFSQLKQ 180

  Fly   298 HVLRHSGVKPFE----------------------------CPECGQKEFNRYILNIHIRVKHRGE 334
            |.:.|||:|||:                            |.|||:...:...|..|:|| |.||
Zfish   181 HQIIHSGLKPFKCSYCDRSFTQAGNRKSHERIHTGEKPHRCTECGRSYKDLTGLKNHMRV-HSGE 244

  Fly   335 KPYACQFCDERFVHSTMRSRHENRVHRNKKT-------------------------PKNFKCNYC 374
            |.|.|:.|.:.| :|....|:..|||.|:|.                         .|:..|:.|
Zfish   245 KQYVCEHCGKGF-NSVSNMRYHLRVHTNEKPHVCSVCGRGFSLLVSCTLHEKIHTGEKDKVCDDC 308

  Fly   375 DKRYESNYQRAKHEVVHTGERNFHCEVCKVSFTRNSNLKTHYR---------------SRQHQNK 424
            .|.:.:|.|..:|.|||:|:|.:.|..|:.||:.:::||.|.|               |.:|.|.
Zfish   309 GKSFVTNGQLKRHRVVHSGKRPYQCSYCEKSFSVSAHLKIHMRLHTGEMPYRCADCGESFRHSNS 373

  Fly   425 L 425
            |
Zfish   374 L 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NnkNP_650659.2 zf-AD 4..74 CDD:214871
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
C2H2 Zn finger 310..331 CDD:275368 8/20 (40%)
C2H2 Zn finger 339..360 CDD:275368 6/20 (30%)
C2H2 Zn finger 371..388 CDD:275370 5/16 (31%)
zf-met 397..421 CDD:463736 9/38 (24%)
C2H2 Zn finger 399..417 CDD:275368 7/17 (41%)
si:ch211-276c2.4XP_002664740.1 C2H2 Zn finger 81..101 CDD:275368 0/19 (0%)
COG5048 <90..369 CDD:227381 68/280 (24%)
C2H2 Zn finger 109..129 CDD:275368 3/19 (16%)
C2H2 Zn finger 137..157 CDD:275368 3/19 (16%)
C2H2 Zn finger 165..185 CDD:275368 7/19 (37%)
C2H2 Zn finger 193..213 CDD:275368 0/19 (0%)
C2H2 Zn finger 221..241 CDD:275368 8/20 (40%)
C2H2 Zn finger 249..269 CDD:275368 6/20 (30%)
C2H2 Zn finger 277..297 CDD:275368 0/19 (0%)
C2H2 Zn finger 305..325 CDD:275368 7/19 (37%)
C2H2 Zn finger 333..353 CDD:275368 8/19 (42%)
C2H2 Zn finger 361..381 CDD:275368 4/14 (29%)
Blue background indicates that the domain is not in the aligned region.

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