DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nnk and CG3847

DIOPT Version :10

Sequence 1:NP_650659.2 Gene:Nnk / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_572317.2 Gene:CG3847 / 31577 FlyBaseID:FBgn0029867 Length:380 Species:Drosophila melanogaster


Alignment Length:380 Identity:82/380 - (21%)
Similarity:134/380 - (35%) Gaps:113/380 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 HDLYKKE------EEESEVNENKEFEDIACEIPFSKEDDEQEQQQEYEDMVDKKTGHDDGEES-- 183
            :.:.|:|      |:::||:..:|.|:   :....:|||.||.|..|.    ..||.||..|:  
  Fly     8 YSMVKEEIVPVLIEQDTEVDPEEEPEE---DEEHVQEDDGQETQYTYA----YTTGDDDDTETAV 65

  Fly   184 ----------------------------QECEESQPDEEES-------------------QQNEE 201
                                        ||..|:...|||:                   ::.||
  Fly    66 VTLSDRDHEALVNAEEVIIDENGHAVTLQELVENSTVEEETIEQGDGTHTILHIVPNIHGEEVEE 130

  Fly   202 DEE----ESQEDDDEL--WQNEDGDSDTDADSMSDIEATSRQSALDEDKKPRRK----------Y 250
            |||    |..|.|||.  ..:|.|:.:.:.|.:..|...|.....::|...|.|          |
  Fly   131 DEELEDGEEVEHDDEFVTVDHEGGELEVEDDEVGSIVFESTIDHAEQDPYGRNKTFYCPNCGNCY 195

  Fly   251 TKRSSPKNDDTDFLKPAKKKRKTYISQKVHICDHCGKKFTDKGNFNLHVLRHSGVKPFECPECGQ 315
            :...|.|     ....|..:::..||.....|..|.|.|........|::||:|.:||.|..|.:
  Fly   196 SAAGSLK-----LHMRACLRQRNEISTDERKCKVCSKVFNSVAYLKEHMMRHTGEQPFRCTRCYR 255

  Fly   316 K-----EFNRYILN-----------IHIRVKHRGE----KPYACQFCDERFVHSTMRSRHENRVH 360
            |     :|..::.:           :.:..:|.|:    |.:.|.||.:.|          ..|.
  Fly   256 KFVEESKFTAHMESHKHQDKLEAEAVALAAQHGGKKVVVKEFQCAFCSQNF----------TVVF 310

  Fly   361 RNKKTPKNFKCNYCDKRYESNYQRAKHEVVHTGERNFHCEVCKVSFTRNSNLKTH 415
            ...:..:.:.|:.|..:|.:.....:|:.....:|.|.|..|...|.....|:.|
  Fly   311 DVGQVKRRYACDACRDKYSNAEALRQHKQQVEEKREFSCVRCGRKFVFEGFLQRH 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NnkNP_650659.2 zf-AD 4..74 CDD:214871
C2H2 Zn finger 282..302 CDD:275368 5/19 (26%)
C2H2 Zn finger 310..331 CDD:275368 4/36 (11%)
C2H2 Zn finger 339..360 CDD:275368 4/20 (20%)
C2H2 Zn finger 371..388 CDD:275370 3/16 (19%)
zf-met 397..421 CDD:463736 6/19 (32%)
C2H2 Zn finger 399..417 CDD:275368 5/17 (29%)
CG3847NP_572317.2 C2H2 Zn finger 188..216 CDD:275368 4/32 (13%)
C2H2 Zn finger 222..242 CDD:275368 5/19 (26%)
C2H2 Zn finger 250..270 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.