DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17802 and blmp-1

DIOPT Version :9

Sequence 1:NP_650659.2 Gene:CG17802 / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001251370.1 Gene:blmp-1 / 172917 WormBaseID:WBGene00003847 Length:817 Species:Caenorhabditis elegans


Alignment Length:199 Identity:56/199 - (28%)
Similarity:90/199 - (45%) Gaps:24/199 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 YTKRSSPKNDDTDFLKPAKKKRKTYISQKV-----HICDHCGKKFTDKGNFNLHVLRHSGVKPFE 309
            :...||..::|:.|     .....|:.|:.     :.|..|.|.|....|..:||..|:|.:||:
 Worm   478 FVNHSSSSHNDSSF-----NGVPNYVQQQENGKTRYACKDCNKTFGQLSNLKVHVRTHTGERPFK 537

  Fly   310 CPECGQKEFNRYI-LNIHIRVKHRGEKPYACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNY 373
            |..| .|||.:.. |..| .:.|.||:|:.|..||:|| .||...:...|:|..:|.   :.|:.
 Worm   538 CEIC-TKEFTQLAHLQKH-HLVHTGERPHRCDICDKRF-SSTSNLKTHLRLHNGQKP---YTCDV 596

  Fly   374 CDKRYESNYQRAKHEVVHTGERNFHCEVCKVSFTRNSNLKTHYRSRQHQNKLI-------AMSAK 431
            ||.::........|:.:|..||.:.|..|...:...|.|:||:::...:.:.:       .|..|
 Worm   597 CDAKFTQYVHLRLHKRLHANERPYSCGTCGKKYISPSGLRTHWKTTTCKEEDMKDSMRDDLMDIK 661

  Fly   432 SEID 435
            .|||
 Worm   662 GEID 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17802NP_650659.2 zf-AD 4..74 CDD:285071
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
C2H2 Zn finger 310..331 CDD:275368 7/21 (33%)
C2H2 Zn finger 339..360 CDD:275368 8/20 (40%)
C2H2 Zn finger 371..388 CDD:275370 3/16 (19%)
zf-met 398..421 CDD:289631 6/22 (27%)
C2H2 Zn finger 399..417 CDD:275368 6/17 (35%)
blmp-1NP_001251370.1 SET 119..247 CDD:214614
zf-C2H2 508..530 CDD:278523 7/21 (33%)
C2H2 Zn finger 510..530 CDD:275368 7/19 (37%)
zf-H2C2_2 522..547 CDD:290200 12/25 (48%)
C2H2 Zn finger 538..558 CDD:275368 7/21 (33%)
zf-H2C2_2 550..575 CDD:290200 11/26 (42%)
C2H2 Zn finger 566..586 CDD:275368 8/20 (40%)
zf-H2C2_2 578..603 CDD:290200 6/27 (22%)
C2H2 Zn finger 594..614 CDD:275368 4/19 (21%)
zf-H2C2_2 606..631 CDD:290200 6/24 (25%)
ARS2 <620..772 CDD:282772 11/46 (24%)
C2H2 Zn finger 622..641 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.