DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17802 and ZNF550

DIOPT Version :9

Sequence 1:NP_650659.2 Gene:CG17802 / 42143 FlyBaseID:FBgn0038549 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001264019.1 Gene:ZNF550 / 162972 HGNCID:28643 Length:422 Species:Homo sapiens


Alignment Length:304 Identity:81/304 - (26%)
Similarity:122/304 - (40%) Gaps:72/304 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 DHDLYKKEEEES--EVNENKEFEDIACEIPFSKEDDEQEQQQEYEDMVDKKTGHDDGEESQECEE 188
            |..|.:..:||.  |:.:.|    :..|....||....:...|.|.:     |.|||..|:..:|
Human   120 DSRLGRARDEEGLLEMQKGK----VTPETDLHKETHLGKVSLEGEGL-----GTDDGLHSRALQE 175

  Fly   189 SQPDEEESQQNEEDEEESQEDDDELWQNEDGDSDTDADSMSDIEATSRQSALDEDKKPRRKYTKR 253
                                     |.:.|...:.|:      :...:.:.:.....|   |..:
Human   176 -------------------------WLSADVLHECDS------QQPGKDALIHAGTNP---YKCK 206

  Fly   254 SSPKNDDTDFLKPAKKKRKTYI--SQKVHI------CDHCGKKFTDKGNFNLHVLRHSGVKPFEC 310
            ...|..:          ||.|:  .|:||.      |:.|||.|:.......|.|.|:|.||::|
Human   207 QCGKGFN----------RKWYLVRHQRVHTGMKPYECNACGKAFSQSSTLIRHYLIHTGEKPYKC 261

  Fly   311 PECGQKEFNR--YILNIHIRVKHRGEKPYACQFCDERFVHSTMRSRHENRVHRNKKTPKNFKCNY 373
            .||| |.|.|  |::..|  ..|.|||||.|..|.:.|.|.:...|| ||.|..:|.   |:|..
Human   262 LECG-KAFKRRSYLMQHH--PIHTGEKPYECSQCRKAFTHRSTFIRH-NRTHTGEKP---FECKE 319

  Fly   374 CDKRYESNYQRAKHEVVHTGERNFHCEVCKVSFTRNSNLKTHYR 417
            |:|.:.:.....:|.::||||:.:.|..|..:|..:|.|..|.|
Human   320 CEKAFSNRAHLIQHYIIHTGEKPYDCMACGKAFRCSSELIQHQR 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17802NP_650659.2 zf-AD 4..74 CDD:285071
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
C2H2 Zn finger 310..331 CDD:275368 9/22 (41%)
C2H2 Zn finger 339..360 CDD:275368 8/20 (40%)
C2H2 Zn finger 371..388 CDD:275370 3/16 (19%)
zf-met 398..421 CDD:289631 7/20 (35%)
C2H2 Zn finger 399..417 CDD:275368 6/17 (35%)
ZNF550NP_001264019.1 KRAB 12..72 CDD:214630
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..158 9/41 (22%)
COG5048 <200..357 CDD:227381 57/176 (32%)
C2H2 Zn finger 205..225 CDD:275368 5/29 (17%)
C2H2 Zn finger 233..253 CDD:275368 7/19 (37%)
C2H2 Zn finger 261..281 CDD:275368 9/22 (41%)
C2H2 Zn finger 289..309 CDD:275368 8/20 (40%)
C2H2 Zn finger 317..337 CDD:275368 4/19 (21%)
C2H2 Zn finger 345..365 CDD:275368 7/19 (37%)
zf-H2C2_2 357..382 CDD:404364 3/7 (43%)
C2H2 Zn finger 373..393 CDD:275368
zf-H2C2_2 385..410 CDD:404364
C2H2 Zn finger 401..421 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4733
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.050

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