DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17806 and ZNF496

DIOPT Version :9

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_116141.1 Gene:ZNF496 / 84838 HGNCID:23713 Length:587 Species:Homo sapiens


Alignment Length:574 Identity:122/574 - (21%)
Similarity:184/574 - (32%) Gaps:208/574 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EHAKSLFDK----EA---RDVLSNILKLTGFWLRNQPGVPTRICLSCLLDLNDAIAFRERCIRTN 70
            |.::.||.:    ||   |:.|..:..|.|.|||  |...|:..:..||.|...:|...|.|:  
Human    39 ESSRRLFRRFRYQEAAGPREALQRLWDLCGGWLR--PERHTKEQILELLVLEQFLAILPREIQ-- 99

  Fly    71 SSWFEKQ----GKQ----------------------------EDSDTETARE------GGNNRLE 97
             ||...|    |:|                            :|.|:...:|      ..::.|.
Human   100 -SWVRAQEPESGEQAVAAVEALEREPGRPWQWLKHCEDPVVIDDGDSPLDQEQEQLPVEPHSDLA 163

  Fly    98 SRVDVMPISIAQ----PQR------------RRILPQRSKKVDGVPLKTVETPIYPLVVPEIPPA 146
            ...|..||::||    |.|            ...|.|.....|...:.|:          ::||:
Human   164 KNQDAQPITLAQCLGLPSRPPSQLSGDPVLQDAFLLQEENVRDTQQVTTL----------QLPPS 218

  Fly   147 -----------------DLVDPLRC---------ED------PIQVKSEPQLSSDYPVESMNHEE 179
                             .|:||.:.         ||      |..:.::|.||..      ...|
Human   219 RVSPFKDMILCFSEEDWSLLDPAQTGFYGEFIIGEDYGVSMPPNDLAAQPDLSQG------EENE 277

  Fly   180 P---------ASEMPQVMKEEPRTLQVIGEVQKNRRKPRSKGCLEECP-----------GKDMAK 224
            |         ..|:|||...:..:||.....::.:|:.......:.||           |.:...
Human   278 PRVPELQDLQGKEVPQVSYLDSPSLQPFQVEERRKREELQVPEFQACPQTVVPQNTYPAGGNPRS 342

  Fly   225 IEN-------IDSTTNKTKEE-----KYATRNKWGAAKRAYAL--EHR--------------LYF 261
            :||       |:...:.:.:|     .|.|.......::..:|  .||              .|.
Human   343 LENSLDEEVTIEIVLSSSGDEDSQHGPYCTEELGSPTEKQRSLPASHRSSTEAGGEVQTSKKSYV 407

  Fly   262 CDQCGKTFSEKGNFNVHLR-RHKGTKEFQCQECDRMEFTQHLLNLHVRIKHRGELPYVCKYCGKR 325
            |..|||.|..:.||..||| |.:..|..:|..|..:......|:.|:. .|..:.||.|..|||.
Human   408 CPNCGKIFRWRVNFIRHLRSRREQEKPHECSVCGELFSDSEDLDGHLE-SHEAQKPYRCGACGKS 471

  Fly   326 FDNCLKRLNHERNHKE----SPVHR------------------------PHVCSTCQKAFKTSTA 362
            |......|:|.|.|.:    .||.:                        ...|..|.|||:.   
Human   472 FRLNSHLLSHRRIHLQPDRLQPVEKREQAASEDADKGPKEPLENGKAKLSFQCCECGKAFQR--- 533

  Fly   363 LKDHIVVHTGE-------QPFHCELCQTFFNRRNALATHYKSKHHRLKVEEQSK 409
             .||:..|...       :||.|..|...|.:...|.     :|.||.::.:||
Human   534 -HDHLARHRSHFHLKDKARPFQCRYCVKSFTQNYDLL-----RHERLHMKRRSK 581

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..76 CDD:285071 22/69 (32%)
zf-C2H2 260..282 CDD:278523 11/22 (50%)
C2H2 Zn finger 262..282 CDD:275368 10/20 (50%)
C2H2 Zn finger 290..311 CDD:275368 4/20 (20%)
COG5048 <298..>383 CDD:227381 28/119 (24%)
C2H2 Zn finger 319..339 CDD:275368 8/19 (42%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
ZnF_U1 375..407 CDD:197732 9/31 (29%)
C2H2 Zn finger 378..396 CDD:275368 4/17 (24%)