DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17806 and LOC549508

DIOPT Version :10

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_031759247.1 Gene:LOC549508 / 549508 XenbaseID:XB-GENE-29098987 Length:1464 Species:Xenopus tropicalis


Alignment Length:287 Identity:81/287 - (28%)
Similarity:117/287 - (40%) Gaps:68/287 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 NHEEPASEMPQV------MKEEPR---TLQVIGEVQKNRRKP---RSKGCLEECPGKDMAKIENI 228
            |.|....|.|.|      |:.|..   |.::...:|.:|.||   ...|  :.|..:...|.::.
 Frog   254 NQEIHKEEKPSVSQHVTQMERESTLVDTTELNAHLQTHREKPLLCNETG--QSCRNESKLKADHG 316

  Fly   229 DSTTNK----TKEEKYATRNKWGAAKRAYAL------EHRLYFCDQCGKTFSEKGNFNVHLRRHK 283
            ..|..|    |:..|..|      :|||..:      |.|.:.|.:|||:|..|...|||||.|.
 Frog   317 IFTGQKPLLCTECGKAFT------SKRALKVHLRVHAEPRPFVCTECGKSFKAKCKLNVHLRIHT 375

  Fly   284 GTKEFQCQECDRMEFTQHLLNLHVRIKHRGELPYVCKYCGKRF---------------------D 327
            |.:.:.|.||.:....:..||.|.|| |.||.|::|..|||.|                     .
 Frog   376 GEQRYVCTECGKCFRDRFGLNEHHRI-HTGEKPFICTECGKSFCRKTPLDAHIQTHTRASLFVCP 439

  Fly   328 NCLKRLNHERN---HKESPVHRPHVCSTCQKAFKTSTALKDHIVVHTGEQPFHCELCQTFFNRRN 389
            .|.:....:||   |......:.:.|:.|.|:|....:|:.|:::||||:||.|..|...|..::
 Frog   440 ECGRSYKDKRNLNDHLNVHTGKTYPCTECGKSFPLKRSLQRHLMIHTGEKPFECMECGKSFRYKS 504

  Fly   390 ALATHYK-------------SKHHRLK 403
            .|..||:             .|..|||
 Frog   505 KLDIHYRIHTGVEPFVCSECGKRFRLK 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..75 CDD:462262
zf-C2H2 260..282 CDD:395048 11/21 (52%)
C2H2 Zn finger 262..282 CDD:275368 11/19 (58%)
C2H2 Zn finger 290..311 CDD:275368 8/20 (40%)
C2H2 Zn finger 319..339 CDD:275368 8/43 (19%)
C2H2 Zn finger 350..370 CDD:275368 6/19 (32%)
ZnF_U1 375..407 CDD:197732 12/42 (29%)
C2H2 Zn finger 378..396 CDD:275368 5/17 (29%)
LOC549508XP_031759247.1 C2H2 Zn finger 183..203 CDD:275368
C2H2 Zn finger 210..230 CDD:275368
C2H2 Zn finger 238..258 CDD:275368 2/3 (67%)
C2H2 Zn finger 298..318 CDD:275368 3/21 (14%)
C2H2 Zn finger 326..346 CDD:275368 6/25 (24%)
C2H2 Zn finger 354..374 CDD:275368 11/19 (58%)
C2H2 Zn finger 382..402 CDD:275368 8/20 (40%)
C2H2 Zn finger 410..430 CDD:275368 5/19 (26%)
COG5048 <429..614 CDD:227381 26/103 (25%)
C2H2 Zn finger 438..458 CDD:275368 4/19 (21%)
C2H2 Zn finger 465..485 CDD:275368 6/19 (32%)
C2H2 Zn finger 493..513 CDD:275368 6/19 (32%)
C2H2 Zn finger 521..541 CDD:275368 4/11 (36%)
COG5048 545..949 CDD:227381
C2H2 Zn finger 549..569 CDD:275368
C2H2 Zn finger 577..597 CDD:275368
C2H2 Zn finger 605..625 CDD:275368
C2H2 Zn finger 633..653 CDD:275368
C2H2 Zn finger 661..681 CDD:275368
C2H2 Zn finger 689..709 CDD:275368
C2H2 Zn finger 717..737 CDD:275368
C2H2 Zn finger 745..765 CDD:275368
C2H2 Zn finger 773..793 CDD:275368
C2H2 Zn finger 801..821 CDD:275368
C2H2 Zn finger 829..849 CDD:275368
C2H2 Zn finger 857..877 CDD:275368
C2H2 Zn finger 885..905 CDD:275368
C2H2 Zn finger 913..933 CDD:275368
C2H2 Zn finger 941..961 CDD:275368
COG5048 965..1346 CDD:227381
C2H2 Zn finger 969..989 CDD:275368
C2H2 Zn finger 997..1017 CDD:275368
C2H2 Zn finger 1025..1045 CDD:275368
C2H2 Zn finger 1083..1103 CDD:275368
C2H2 Zn finger 1111..1131 CDD:275368
C2H2 Zn finger 1139..1159 CDD:275368
C2H2 Zn finger 1167..1187 CDD:275368
C2H2 Zn finger 1195..1215 CDD:275368
C2H2 Zn finger 1223..1243 CDD:275368
C2H2 Zn finger 1251..1271 CDD:275368
C2H2 Zn finger 1279..1299 CDD:275368
C2H2 Zn finger 1307..1327 CDD:275368
C2H2 Zn finger 1335..1355 CDD:275368
C2H2 Zn finger 1363..1383 CDD:275368
zf-H2C2_2 1375..1399 CDD:463886
C2H2 Zn finger 1391..1411 CDD:275368
zf-H2C2_2 1403..1427 CDD:463886
C2H2 Zn finger 1419..1439 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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