DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17806 and ZNF562

DIOPT Version :9

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001123503.1 Gene:ZNF562 / 54811 HGNCID:25950 Length:426 Species:Homo sapiens


Alignment Length:208 Identity:69/208 - (33%)
Similarity:101/208 - (48%) Gaps:30/208 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 EVQKNRRKPRSKGCLEEC----PGKDMAKIENI-DSTTNKTKEEKYATRNKWGAAKRAYALEHRL 259
            |.|:..|...:...|::|    .||...|.:|. .|.||.::...:|..:|          ..:.
Human   233 EFQECERAITTSSHLKQCVAVHTGKKSEKTKNCGKSFTNFSQLSAHAKTHK----------GEKS 287

  Fly   260 YFCDQCGKTFSEKGNFNVHLRRHKGTKEFQCQECDRMEFTQ--HLLNLHVRIKHRGELPYVCKYC 322
            :.|.:||::|....:||||::.|.|.|..:|.||.: .||:  ||.. ||| .|.|..||.||.|
Human   288 FECKECGRSFRNSSSFNVHIQIHTGIKPHKCTECGK-AFTRSTHLTQ-HVR-THTGIKPYECKEC 349

  Fly   323 GKRFDNCLKRLNHERNHKESPVHRPHVCSTCQKAFKTSTALKDHIVVHTGEQPFHCELC-QTFFN 386
            |:.|........|.|||..   .:|:.|..|.|||..|:.|..|..:||||:|:.|..| :||  
Human   350 GQAFTQYTGLAIHIRNHTG---EKPYQCKECGKAFNRSSTLTQHRRIHTGEKPYECVECGKTF-- 409

  Fly   387 RRNALATHYKSKH 399
                :.:.::|||
Human   410 ----ITSSHRSKH 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..76 CDD:285071
zf-C2H2 260..282 CDD:278523 8/21 (38%)
C2H2 Zn finger 262..282 CDD:275368 8/19 (42%)
C2H2 Zn finger 290..311 CDD:275368 10/22 (45%)
COG5048 <298..>383 CDD:227381 36/87 (41%)
C2H2 Zn finger 319..339 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
ZnF_U1 375..407 CDD:197732 8/26 (31%)
C2H2 Zn finger 378..396 CDD:275368 4/18 (22%)
ZNF562NP_001123503.1 KRAB 40..81 CDD:307490
COG5048 <117..308 CDD:227381 22/84 (26%)
C2H2 Zn finger 181..198 CDD:275370
C2H2 Zn finger 206..226 CDD:275368
COG5048 <258..420 CDD:227381 62/183 (34%)
C2H2 Zn finger 263..282 CDD:275368 5/18 (28%)
C2H2 Zn finger 290..310 CDD:275368 8/19 (42%)
C2H2 Zn finger 318..338 CDD:275368 10/22 (45%)
C2H2 Zn finger 346..366 CDD:275368 7/19 (37%)
C2H2 Zn finger 374..394 CDD:275368 8/19 (42%)
C2H2 Zn finger 402..422 CDD:275368 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4733
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.050

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