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Protein Alignment CG17806 and CG12071

DIOPT Version :10

Sequence 1:	NP_650658.1	Gene:	CG17806 / 42142	FlyBaseID:	FBgn0038548	Length:	421	Species:	Drosophila melanogaster
Sequence 2:	NP_651832.3	Gene:	CG12071 / 43660	FlyBaseID:	FBgn0039808	Length:	581	Species:	Drosophila melanogaster

Alignment Length:	361	Identity:	75/361 - (20%)
Similarity:	126/361 - (34%)	Gaps:	93/361 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    74 FEKQGKQEDSDTETAREGGNNRLESRVDVMPISIAQPQRRRILPQRSKKVDGVPLKTVETPIYPL 138
            |::|...:..::.||....|::....:........|.|:::...|:.:.....           :
  Fly    30 FKQQQTSQQQNSPTANNNNNSQNNGNMQQQQQQQQQQQQQQQQQQQQQHYAAT-----------I 83

  Fly   139 VVPEIPPADLVDPLRCEDPIQVKSEPQLSSDYPVESMNHEEPASEMPQVMKEEPRTLQVIG---- 199
            .||:|..:::......|....|          |.:.|..|...           |.||.:|
  Fly    84 KVPQISSSNVAAAAAGESTFTV----------PDDGMGFEGGV-----------RVLQSLGTWSA 127

  Fly   200 --EVQKNRRKPR---------SKGCLEECPG-KDMAKIENIDSTTNKTKEEKYATRNKWGAAKRA 252
              ::..|..||.         ..|.:..... |.:.:::...|...||...|  :.||
  Fly   128 AEQLTYNIPKPNLIPFTEPYVEGGSMHPASRLKALQQVQQASSGVRKTNPSK--STNK------- 183

  Fly   253 YALEHRLYFCDQCGKTFSEKGNFNVHLRRHKGTKEFQCQECDRMEFTQHLLNLHV-RIKHRGELP 316
             |.|     |..|||..:.|....:|:|.|.|.|.:.|:.|::....:..|.:|: :.||  ..|
  Fly   184 -AFE-----CTVCGKGLARKDKLTIHMRIHTGEKPYICEVCNKAFARRDKLVIHMNKFKH--VTP 240

  Fly   317 YVCKYCGKRFDNCLKRLNHERNHKESPVHRP----------------HVCS---TCQKAFKTSTA 362
            ......|||.:|.:|:       ||.|...|                .|.:   ..|.|....|:
  Fly   241 TNIAPLGKRLNNMVKK-------KEQPDPPPEDNKQSLELQLQQQAVQVAAQNIIVQSAQGAPTS 298

  Fly   363 LKDHIVVHTGEQ-PFHCELCQTFFNRRNALATHYKS 397
            :...|:.|..:| .:.||||...|:.|:..:.|.||
  Fly   299 IPGIIIPHHQQQLSWTCELCGRMFSSRDEWSIHAKS 334

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.