DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17806 and CG31365

DIOPT Version :10

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_732827.1 Gene:CG31365 / 42736 FlyBaseID:FBgn0051365 Length:639 Species:Drosophila melanogaster


Alignment Length:643 Identity:117/643 - (18%)
Similarity:187/643 - (29%) Gaps:277/643 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTTLCRTCGQEAEHAKSLFDKE--ARDVLSNILKLTGFWLRNQPGVPTRICLSCLLDLNDAIAFR 63
            :.||||.|.:|.:.|.::||::  ...:...::.......:....:|.|||..|...|..:..||
  Fly    10 LATLCRLCLKEHQDAYAIFDEDDTQLSIPVRLMACVALDAKATDTLPKRICQECRYQLEKSFLFR 74

  Fly    64 ERCIRTNSSWFEKQ----------GK--------------------------------------- 79
            :||     .|.||:          ||                                       
  Fly    75 QRC-----QWAEKKLRKHIRLLGLGKRSRVFSKDPDDYDEDELEFEDSIAFIEVQDKVRKLEDEK 134

  Fly    80 -QEDSDTETAREGGNNRLESRV------------------------------------------- 100
             :||...|.|.|.....::||:                                           
  Fly   135 WREDFKEEQAAEMHKRLVKSRLELRAKLTTELRKELAEEVRSEVRKELAEEVRSQVRDDLRNEVS 199

  Fly   101 -DVMPISIA----------------------------QPQ----------RRRILPQRSKKVDGV 126
             |:....:|                            :||          :.:.||:|...:...
  Fly   200 EDIRKEQLAMLLGELEVYLTEKKAGRWESLDGSEPETKPQVKEDASPSRSKTKALPKRRPSLVDA 264

  Fly   127 PLKTVE-----------------------TPIYPLVVPEIPPAD--------------------- 147
            .||..|                       ..|..|.:.|..||:                     
  Fly   265 NLKATEARKDAKEEEFILGCNTDPANNSDVNIDGLELDEEVPAESGEDFREINMVGSDVVHTDNG 329

  Fly   148 ---LVDPLRCEDPIQVKSEPQLSSDYPVESMNHEEPASEMPQVMKEEPRTLQ------------- 196
               :::....||..| .|.|:...|..:.|.|.:|...  .|...|:|..::             
  Fly   330 EIYIINSASSEDQNQ-DSTPEFDQDNGITSYNIKEDGE--IQFSGEKPEEIEDVVVFNLGEEISQ 391

  Fly   197 -----------VIGEVQKN--------RRKPRSKGCLEE---CPGKDMAKIENIDSTTNKTKE-- 237
                       :|.|.::|        :||..|:...::   ||.....:|      |:..|.  
  Fly   392 EQQVFSFHENVIIVEKEQNDRDEQTPLKRKRSSELVFKQESSCPQPKTGRI------TDTVKSFQ 450

  Fly   238 ----------EKYATRN-----------KWGAAKRAYALEHRLYFCDQCGKTFSEKGNFNVHLRR 281
                      :|..||:           |.|..|           |..|....|...:...|:..
  Fly   451 CHLCPVAFPTQKLLTRHHNTHIKGLKSGKGGTLK-----------CPSCALQLSCASSLKRHMII 504

  Fly   282 HKGTKEFQCQECDRMEFTQ-HLLNLHVRIKHRGELPYVCKYCGKRFDNCLKRLNHERNHKESPVH 345
            |.|.|.|:|.||: :.|:| .:|..|:. .|.|...:.|..|    .:|..:.::.:.| ...||
  Fly   505 HTGLKPFKCSECE-LSFSQREVLKRHMD-THTGVKRHQCPQC----SSCFAQKSNLQQH-IGRVH 562

  Fly   346 ----RPHVCSTCQKAFKTSTALKDHIVVHTGEQPFHCELCQTFFNRRNALATHYKSKH 399
                |.|.|..|.::|...:.|..|:|.|.|.. |.|:.|...||.|:|:..|..:.|
  Fly   563 MGNSRTHKCHLCHRSFNHVSGLSRHLVTHAGVM-FSCKQCGRQFNDRSAVQRHVTTMH 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..75 CDD:462262 19/72 (26%)
zf-C2H2 260..282 CDD:395048 4/21 (19%)
C2H2 Zn finger 262..282 CDD:275368 4/19 (21%)
C2H2 Zn finger 290..311 CDD:275368 7/21 (33%)
C2H2 Zn finger 319..339 CDD:275368 3/19 (16%)
C2H2 Zn finger 350..370 CDD:275368 6/19 (32%)
ZnF_U1 375..407 CDD:197732 9/25 (36%)
C2H2 Zn finger 378..396 CDD:275368 7/17 (41%)
CG31365NP_732827.1 zf-AD 13..86 CDD:214871 21/77 (27%)
PTZ00121 <110..354 CDD:173412 27/244 (11%)
zf-C2H2_8 454..542 CDD:464935 23/100 (23%)
C2H2 Zn finger 485..505 CDD:275368 4/19 (21%)
zf-H2C2_2 497..522 CDD:463886 9/25 (36%)
C2H2 Zn finger 513..533 CDD:275368 7/21 (33%)
zf-H2C2_2 526..550 CDD:463886 7/28 (25%)
C2H2 Zn finger 541..562 CDD:275368 4/25 (16%)
C2H2 Zn finger 571..591 CDD:275368 6/19 (32%)
C2H2 Zn finger 598..617 CDD:275368 7/18 (39%)

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