DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17806 and CG4424

DIOPT Version :9

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:411 Identity:111/411 - (27%)
Similarity:165/411 - (40%) Gaps:105/411 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTTLCRTCGQEAE-HAKSLFDKEARDVL-------SNILKLTGFWLR---NQPGVPTRICLSCLL 54
            |.||||||.|:.| |..|:| :.|.|.|       ..|..|:|..:|   .:..:||||||.|..
  Fly     7 MMTLCRTCLQDGEAHMVSIF-QTADDRLPGGVSLCDKIESLSGIQIRATAKEEVLPTRICLRCKA 70

  Fly    55 DLNDAIAFRERCIRTNSSWFEKQGKQEDSDTETAREGGNNRLESRVDVMPISIAQPQRRRILPQR 119
            .|..|..||:.|.|:|               |..||          .|:..::.|...:.:: |:
  Fly    71 FLTLAHKFRQICQRSN---------------EFLRE----------YVIKDAVEQGVVKEVV-QQ 109

  Fly   120 SKKVDGVPLKTVETPIYPLVVPEIPPADLVDPLRCEDPIQVKSEPQLSSDYPVESMNHEEPASEM 184
            ::.....|::|.:..         ||.|           :|..|...|::.|:|...| .||.  
  Fly   110 TRPSTPPPIETEQLE---------PPED-----------EVLEEGVWSTEDPIEETPH-GPAE-- 151

  Fly   185 PQVMKEEPRTLQVIGEVQKNRRKPRSKGCLEECPGKDMAKIENIDSTTNKTKEEKYATRNKWGAA 249
                ||.|..|.|                 |..|.                   .|.........
  Fly   152 ----KERPTVLTV-----------------EMLPA-------------------PYPPPASTPPP 176

  Fly   250 KRAYALEHRLYFCDQCGKTFSEKGNFNVHLRRHKGTKEFQCQECDRMEFTQHLLNLHVRIKHRGE 314
            ..|.|::.:|:.|..||..:..|...:.|:|||...:.::|:.|.:.....:.|..|:| :|.|.
  Fly   177 APAGAVKGKLHVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIR-QHTGA 240

  Fly   315 LPYVCKYCGKRFDNCLKRLNHERNHKESPVHRPHVCSTCQKAFKTSTALKDHIVVHTGEQPFHCE 379
            .||.|:||.:.|.:....:.|||.|:.   .||:.|.||.|.|..::.||.|...||||:|..|:
  Fly   241 KPYTCQYCQRNFADRTSLVKHERTHRN---ERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQ 302

  Fly   380 LCQTFFNRRNALATHYKSKHH 400
            ||...|.|.:.|..|.:::.|
  Fly   303 LCNKSFARIHNLVAHLQTQQH 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..76 CDD:285071 31/82 (38%)
zf-C2H2 260..282 CDD:278523 6/21 (29%)
C2H2 Zn finger 262..282 CDD:275368 6/19 (32%)
C2H2 Zn finger 290..311 CDD:275368 5/20 (25%)
COG5048 <298..>383 CDD:227381 33/84 (39%)
C2H2 Zn finger 319..339 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
ZnF_U1 375..407 CDD:197732 9/26 (35%)
C2H2 Zn finger 378..396 CDD:275368 7/17 (41%)
CG4424NP_650859.3 zf-AD 10..92 CDD:285071 34/107 (32%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
DUF45 <204..281 CDD:302795 27/80 (34%)
COG5048 210..>345 CDD:227381 40/118 (34%)
C2H2 Zn finger 217..237 CDD:275368 5/20 (25%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
zf-H2C2_2 257..282 CDD:290200 11/27 (41%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..310 CDD:290200 12/23 (52%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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