DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17806 and Odj

DIOPT Version :9

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_650661.1 Gene:Odj / 42145 FlyBaseID:FBgn0038551 Length:430 Species:Drosophila melanogaster


Alignment Length:435 Identity:123/435 - (28%)
Similarity:176/435 - (40%) Gaps:84/435 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTTLCRTCGQE--AEHAKSLFDKEARDVLSNILKLTGFWLRNQPGVPTRICLSCLLDLNDAIAFR 63
            |:|.||.||:.  ..|.|::|:|....:...|.::||..:..:..:|..||..|||||..|:|||
  Fly     1 MSTECRICGERIFTPHPKNIFEKRNHRIRMAIEQITGLEIVLENMLPQHICACCLLDLTQAVAFR 65

  Fly    64 ERCIRTNSSWFEKQGKQEDSDTETAREGGNNRLESRVDVMPISIAQPQRRRILPQRSKKVDGVPL 128
            :||:.|:::                                           |.||.....||..
  Fly    66 QRCLETHAN-------------------------------------------LHQRISSKAGVAS 87

  Fly   129 KTVETPIYPLVVPEIPPADLVDPLR----CEDPIQVKSEPQLSS------DYPVESMNHEEPASE 183
            |.         .||:.|. |.|||.    .:|.:..:.:.:|..      |...:.:..|:|...
  Fly    88 KG---------SPEVSPV-LSDPLLKREVLDDTVDTEDDKELLDDDKDLMDDDKDFLEDEKPILR 142

  Fly   184 MPQVMKEEPRTLQVIGEVQKNRRKPRSKGCLEECPGKDMAKIENIDSTTNKTKEEKYATRNKWGA 248
            .|...|     :::..:...||:.||.:......|     .:|..||.....:|.....|.:...
  Fly   143 YPPAKK-----IRIEDQNFPNRQSPRVRVKRLRVP-----VVEKADSPPPPPREHVRKPRKRRPK 197

  Fly   249 AKRAYALEHRLYFCDQCGKTFSEKGNFNVHLRRHKGTKEFQCQECDRMEFTQHLLNLHVRIKHRG 313
            .|...:::.  |.|||||.:|::..|...|..||...| |.|.||.|..:|..||.||:|:.|:|
  Fly   198 PKVDRSIKR--YVCDQCGWSFNDHSNMKDHKLRHFEEK-FSCDECGRKFYTMPLLRLHIRVHHKG 259

  Fly   314 ELPYVCKYCGKRFDNCLKRLNHERN-HKESPVHRPHVCSTCQKAFKTSTALKDHIVVHTGEQP-F 376
            |.|||||:||..|.|...|..|||. |....|   |.|..|.|.|.:......|...|..:|| .
  Fly   260 EKPYVCKFCGMGFANSPSRCRHERQMHANELV---HPCKICGKRFNSEKGRLKHEEGHKSDQPDV 321

  Fly   377 H-CELCQTFFNRRNALATHYKSKHHRLKVEEQSKMPKMDATVQAD 420
            | |..|...|.....|..||.:|:||.:|......||.:...:.|
  Fly   322 HICLTCNKEFKEAQFLHRHYSTKYHRKRVNLLVNGPKEEFQSEVD 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..76 CDD:285071 26/73 (36%)
zf-C2H2 260..282 CDD:278523 9/21 (43%)
C2H2 Zn finger 262..282 CDD:275368 8/19 (42%)
C2H2 Zn finger 290..311 CDD:275368 10/20 (50%)
COG5048 <298..>383 CDD:227381 36/87 (41%)
C2H2 Zn finger 319..339 CDD:275368 10/20 (50%)
C2H2 Zn finger 350..370 CDD:275368 5/19 (26%)
ZnF_U1 375..407 CDD:197732 12/33 (36%)
C2H2 Zn finger 378..396 CDD:275368 5/17 (29%)
OdjNP_650661.1 zf-AD 5..77 CDD:214871 27/114 (24%)
COG5048 <202..343 CDD:227381 57/146 (39%)
C2H2 Zn finger 209..229 CDD:275368 8/19 (42%)
C2H2 Zn finger 236..256 CDD:275368 10/19 (53%)
zf-H2C2_2 249..274 CDD:290200 15/24 (63%)
C2H2 Zn finger 265..283 CDD:275368 8/17 (47%)
C2H2 Zn finger 298..314 CDD:275368 3/15 (20%)
zf-C2H2_jaz 322..347 CDD:288983 8/24 (33%)
C2H2 Zn finger 324..343 CDD:275368 6/18 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450090
Domainoid 1 1.000 48 1.000 Domainoid score I19075
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.890

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