DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17806 and ich

DIOPT Version :9

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001262393.1 Gene:ich / 41069 FlyBaseID:FBgn0286204 Length:592 Species:Drosophila melanogaster


Alignment Length:63 Identity:25/63 - (39%)
Similarity:36/63 - (57%) Gaps:4/63 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 KESPVHRPHVCSTCQKAFKTSTALKDHIVVHTGEQPFHCELCQTFFNRRNALATHYKSKHHRL 402
            ||.||||   ||.|.:.|...:.:|.|:..||||:||.|::|...|.::..|..| :..|.|:
  Fly   531 KEKPVHR---CSICNRGFLNKSNIKVHLRTHTGEKPFRCDVCAKAFRQKAHLLKH-QQIHKRI 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..76 CDD:285071
zf-C2H2 260..282 CDD:278523
C2H2 Zn finger 262..282 CDD:275368
C2H2 Zn finger 290..311 CDD:275368
COG5048 <298..>383 CDD:227381 20/42 (48%)
C2H2 Zn finger 319..339 CDD:275368
C2H2 Zn finger 350..370 CDD:275368 6/19 (32%)
ZnF_U1 375..407 CDD:197732 9/28 (32%)
C2H2 Zn finger 378..396 CDD:275368 5/17 (29%)
ichNP_001262393.1 C2H2 Zn finger 538..558 CDD:275368 6/19 (32%)
zf-H2C2_2 550..575 CDD:316026 11/24 (46%)
C2H2 Zn finger 566..586 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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