DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17806 and znfl2a

DIOPT Version :10

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_919371.2 Gene:znfl2a / 373087 ZFINID:ZDB-GENE-030828-7 Length:306 Species:Danio rerio


Alignment Length:281 Identity:77/281 - (27%)
Similarity:118/281 - (41%) Gaps:32/281 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 EDPIQVKSEPQLSSDYPVESMNHEEPASEMPQVMKEEPRTLQVIGEVQKNRRKPRSKGCLEECPG 219
            |....:...|:.:.|...|  .:|||:.|..:...||        :.:::.....|....||...
Zfish    11 EQQTDLMEVPEETKDLSKE--ENEEPSEEDSEESSEE--------DSEEDSDAVLSAELSEEDSE 65

  Fly   220 KDMAKIENIDSTTNKTKEEKYATRNKWGAAKRAYAL-------EH-RL------YFCDQCGKTFS 270
            :|..:.:|..||..|..:::...|..|...:...:|       :| |:      :.|..|||:|.
Zfish    66 EDSDEEQNQTSTRKKVLQKRAGGRKTWSCRQCGKSLTSSGSLRDHMRIHTGETPFSCRYCGKSFK 130

  Fly   271 EKGNFNVHLRRHKGTKEFQCQECDRMEFTQHLLNLHVRIKHRGELPYVCKYCGKRFDNCLKRLNH 335
            .|.....|||.|.|.|.|||..|.:....:..|..|.|| |.|...|.|:.|||.|........|
Zfish   131 TKAPLTEHLRIHTGEKPFQCSLCQKSFTHRSSLREHTRI-HAGIKAYSCQECGKSFTLRQYYTTH 194

  Fly   336 ERNHKESPVHRPHVCSTCQKAFKTSTALKDHIVVHTGEQPFHCELCQTFFNRRNALATHYKSKHH 400
            .:.|.:   |:|.:||.|.|.|.:...||.|..||:..:|:||..|...|.:.:.|..|.||..|
Zfish   195 LKTHYK---HKPLLCSVCGKGFNSPVQLKAHEPVHSELKPYHCNPCGRSFRQVSCLQRHLKSFIH 256

  Fly   401 RLKVEEQSKMPKMDATVQADG 421
                .:...:.|:...:::.|
Zfish   257 ----NKYRPLEKLTEQIRSSG 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..75 CDD:462262
zf-C2H2 260..282 CDD:395048 9/21 (43%)
C2H2 Zn finger 262..282 CDD:275368 9/19 (47%)
C2H2 Zn finger 290..311 CDD:275368 6/20 (30%)
C2H2 Zn finger 319..339 CDD:275368 6/19 (32%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
ZnF_U1 375..407 CDD:197732 10/31 (32%)
C2H2 Zn finger 378..396 CDD:275368 5/17 (29%)
znfl2aNP_919371.2 COG5048 <93..246 CDD:227381 50/156 (32%)
C2H2 Zn finger 94..114 CDD:275368 3/19 (16%)
C2H2 Zn finger 122..142 CDD:275368 9/19 (47%)
C2H2 Zn finger 150..170 CDD:275368 6/20 (30%)
C2H2 Zn finger 178..198 CDD:275368 6/19 (32%)
C2H2 Zn finger 206..226 CDD:275368 8/19 (42%)
C2H2 Zn finger 234..256 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.

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