DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17806 and CG15710

DIOPT Version :10

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_611122.1 Gene:CG15710 / 36832 FlyBaseID:FBgn0034120 Length:265 Species:Drosophila melanogaster


Alignment Length:249 Identity:52/249 - (20%)
Similarity:74/249 - (29%) Gaps:89/249 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 EPRTLQVIGEVQKNRRKPRSKGCLEECPGKDMAKIENIDSTTNKTKEEKYATRNKWGAAKRAYAL 255
            ||.||..|.|......|.....||:                  ..||||....:           
  Fly    13 EPATLLSIQEDNGIVTKVYVAPCLQ------------------PIKEEKVFLED----------- 48

  Fly   256 EHRLYFCDQCGKTFSEKGNFNVHLRRHKGTKEFQCQE------CDRMEFTQHLLNLHVRIKHRGE 314
            ..:.:.|..|.......|.:.|||        ..||.      .|..:.:||             
  Fly    49 NTQRFHCPLCSNVIRTAGAYKVHL--------MACQRRLARMMKDVPDVSQH------------- 92

  Fly   315 LPYVCKYCGKRFDNCLKRLNHERNHKESPVHRPHVCSTCQKAFKTS----TALKDHIV------- 368
               .|..|.|.|.:....:.|...|....::|  .|::|...|.|.    |.|:.|::       
  Fly    93 ---QCNICKKIFSSVDALIGHRLLHGSPSMNR--TCASCHVKFGTDLEYRTHLESHLIPCESTDE 152

  Fly   369 ----VHTGEQPFHCELCQTFF---------NRRNALATHYKSKHHRLKVEEQSK 409
                .:|..:.|:|..|:|.|         .||.|......    |||.:|:.|
  Fly   153 SYEGAYTITKTFNCVFCRTEFKACFKPGQVTRRYACDACIV----RLKAQEEEK 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..75 CDD:462262
zf-C2H2 260..282 CDD:395048 6/21 (29%)
C2H2 Zn finger 262..282 CDD:275368 6/19 (32%)
C2H2 Zn finger 290..311 CDD:275368 5/26 (19%)
C2H2 Zn finger 319..339 CDD:275368 5/19 (26%)
C2H2 Zn finger 350..370 CDD:275368 7/34 (21%)
ZnF_U1 375..407 CDD:197732 11/40 (28%)
C2H2 Zn finger 378..396 CDD:275368 7/26 (27%)
CG15710NP_611122.1 None
Blue background indicates that the domain is not in the aligned region.

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