DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17806 and CG17328

DIOPT Version :10

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster


Alignment Length:417 Identity:91/417 - (21%)
Similarity:144/417 - (34%) Gaps:156/417 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LCRTCGQEAEHAKSLFDKEARDVLSNIL----KLTGFWLRNQPGVPTRICLSCLLDLNDAIAFRE 64
            :||.|.:|.....|::..:...:.|.:|    |:..|   ...|:|:.||.:|:..|..|..|::
  Fly     8 ICRVCLEELHPVTSIYSTDFAMMPSVMLMQCAKIRVF---KTDGLPSVICNNCIYRLGVAFHFKQ 69

  Fly    65 RCIRTN----------SSWFEKQGKQEDSDTETAREGGNNRLESRVDVMPISIAQPQRRRILPQR 119
            .|..::          .||      ::|:.|.|                                
  Fly    70 ECENSDLRLRQYLGILESW------RQDAATNT-------------------------------- 96

  Fly   120 SKKVDGVPLKTVETPIYPLVVPEIPPADLVDPLRCEDPIQVKSEPQLSSDYPVESMNHEEPASEM 184
                     ..||.|:.                           ||..||               
  Fly    97 ---------DFVEKPLL---------------------------PQRDSD--------------- 110

  Fly   185 PQVMKEEPRTLQVIGEVQKNRRKPRSKGCLEECPGKDMAKIENIDSTTNKTKEEKYATRNKWGAA 249
                :|||...:|.....:.:|||                            .|::..|......
  Fly   111 ----EEEPVDAKVSKRRSRYQRKP----------------------------PEEHKKRGPKPVP 143

  Fly   250 KRAYALEHRLYFCDQCGKTFSEKGNFNVHLRRHKGTKEFQCQECDRMEFTQHLLNLHVRIKHRGE 314
            |..:.       |.:|.|:|........|:|.|.|.|.:||..|.:....::.|.:|.| .|.|:
  Fly   144 KMPHT-------CYECHKSFKCIAQLTQHIRTHTGEKPYQCSFCIQRFAQKYNLKVHER-THTGD 200

  Fly   315 LPYVCKYCGKRFDNCLKRLNHERNHKESPVH---RPHVCSTCQKAFKTSTALKDHIVVHTGEQPF 376
            .|:.|:.|.|:|    ..|.:.:.|::  :|   |..|||.|||.|.|:..|..|::.|||.:..
  Fly   201 KPFQCEICSKQF----SALGNFQAHQK--IHLGVRDQVCSLCQKGFYTAGDLSKHMITHTGIKNH 259

  Fly   377 HCELCQTFFNRRNALATHYKSKHHRLK 403
            ||::|...|:||..:.|| |.|.|.|:
  Fly   260 HCDVCGKAFSRRRDMRTH-KLKLHPLE 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..75 CDD:462262 20/84 (24%)
zf-C2H2 260..282 CDD:395048 6/21 (29%)
C2H2 Zn finger 262..282 CDD:275368 6/19 (32%)
C2H2 Zn finger 290..311 CDD:275368 5/20 (25%)
C2H2 Zn finger 319..339 CDD:275368 5/19 (26%)
C2H2 Zn finger 350..370 CDD:275368 9/19 (47%)
ZnF_U1 375..407 CDD:197732 12/29 (41%)
C2H2 Zn finger 378..396 CDD:275368 7/17 (41%)
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 18/74 (24%)
COG5048 146..>211 CDD:227381 20/72 (28%)
C2H2 Zn finger 149..169 CDD:275368 6/19 (32%)
C2H2 Zn finger 177..197 CDD:275368 5/20 (25%)
zf-H2C2_2 189..213 CDD:463886 10/28 (36%)
C2H2 Zn finger 205..225 CDD:275368 6/25 (24%)
C2H2 Zn finger 233..253 CDD:275368 9/19 (47%)
zf-H2C2_2 245..270 CDD:463886 9/24 (38%)
C2H2 Zn finger 261..282 CDD:275368 9/21 (43%)
C2H2 Zn finger 318..338 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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