DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17806 and zld

DIOPT Version :9

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001285466.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster


Alignment Length:366 Identity:84/366 - (22%)
Similarity:144/366 - (39%) Gaps:94/366 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 GKQEDSDTETAREGGNNRLESR----VDVMPISIAQP----QRRRILPQRS-KKVDGVPLKTVET 133
            |...::.|.||..|.:|::.:.    :.:||.|:..|    ....:..||| ::.|..|:.|:.|
  Fly  1130 GSGPEAHTGTAGGGYSNQITTSDGQILQLMPTSLFAPYAPLSPYSVAAQRSPQEGDLPPVHTLTT 1194

  Fly   134 PIY-------------PLVVPEIPPADLVDPLRCEDPIQVKSEP--QLSSDYPVE--SMNHEE-- 179
            .::             .|.|...|.:..|...|....:::....  |...||.:|  .|.|::  
  Fly  1195 ALHAHQQGGQQEAQTPTLTVLSTPYSPTVSSSRATPALEMDMATLMQHHQDYEMEQYQMQHQQLD 1259

  Fly   180 ---------PASEMPQVMKEEPRTLQVIGEVQKNRRKPRSKGCLEECPGKDMAKIENIDSTTNKT 235
                     ...:..|::.::.:|:     .|:...|.|..|                ::|.:.|
  Fly  1260 QMQQHQQQLDHQQQQQILADQTQTM-----AQQPLAKKRRGG----------------NATPSTT 1303

  Fly   236 KEEKYATRNKWGAAKRAYALEHRLYFCDQCGKTFSEKGNFNVHLRRHKGTKEFQCQECDRMEFTQ 300
            |..    ||                         |..|:.:.|.......: .:|.|||: |||:
  Fly  1304 KRR----RN-------------------------SSVGSTSPHSTTLPSGR-IKCLECDK-EFTK 1337

  Fly   301 H-LLNLHVRIKHRGELPYVCKYCGKRFDNCLKRLNHERNHKESPVHRPHVCSTCQKAFKTSTALK 364
            : .|..|.:..|.||.|:.|:.|||||.:......|...|:..  .:||.|..|.|.|...|.|:
  Fly  1338 NCYLTQHNKSFHSGEYPFRCQKCGKRFQSEDVYTTHLGRHRTQ--DKPHKCELCPKQFHHKTDLR 1400

  Fly   365 DHI-VVHTGEQPFHCELCQTFFNRRNALATHYKSKHHRLKV 404
            .|: .:|||.:...|::|:..|.|::.|..|.:: |:|.:|
  Fly  1401 RHVEAIHTGLKQHMCDICEKGFCRKDHLRKHLET-HNRPRV 1440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..76 CDD:285071
zf-C2H2 260..282 CDD:278523 3/21 (14%)
C2H2 Zn finger 262..282 CDD:275368 3/19 (16%)
C2H2 Zn finger 290..311 CDD:275368 9/21 (43%)
COG5048 <298..>383 CDD:227381 30/86 (35%)
C2H2 Zn finger 319..339 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368 7/20 (35%)
ZnF_U1 375..407 CDD:197732 9/30 (30%)
C2H2 Zn finger 378..396 CDD:275368 6/17 (35%)
zldNP_001285466.1 zf-C2H2_jaz 552..577 CDD:288983
LIM 1328..1389 CDD:259829 24/63 (38%)
C2H2 Zn finger 1328..1349 CDD:275368 9/21 (43%)
C2H2 Zn finger 1357..1377 CDD:275368 7/19 (37%)
C2H2 Zn finger 1386..1407 CDD:275368 7/20 (35%)
zf-H2C2_2 1398..1422 CDD:290200 7/23 (30%)
zf-C2H2 1413..1435 CDD:278523 6/22 (27%)
C2H2 Zn finger 1415..1435 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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