DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17806 and erm

DIOPT Version :9

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster


Alignment Length:226 Identity:64/226 - (28%)
Similarity:89/226 - (39%) Gaps:31/226 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 PASEMPQVMKEEPRTLQVIGEVQKNR------RKPRSKGCLEECPGKDMAKIENIDSTTNKTKEE 238
            |||..........|:....|.::.:.      .||::..|| ||     .|:.|  :..|.|:..
  Fly   281 PASTATSATGARSRSPSPQGSIEDSSPGSASGGKPKTFSCL-EC-----GKVFN--AHYNLTRHM 337

  Fly   239 KYATRNKWGAAKRAYALEHRLYFCDQCGKTFSEKGNFNVHLRRHKGTKEFQCQECDRMEFTQHLL 303
            ...|    ||         |.:.|..|||.|.:......|...|...|..:||.|.:.......|
  Fly   338 PVHT----GA---------RPFVCKVCGKGFRQASTLCRHKIIHTSEKPHKCQTCGKAFNRSSTL 389

  Fly   304 NLHVRIKHRGELPYVCKYCGKRFDNCLKRLNHERNHKESPVHRPHVCSTCQKAFKTSTALKDHIV 368
            |.|.|| |.|..|:||:||||.|.......||:..|.....::   |:.|.|||.....|..|:.
  Fly   390 NTHSRI-HAGYKPFVCEYCGKGFHQKGNYKNHKLTHSGEKAYK---CNICNKAFHQVYNLTFHMH 450

  Fly   369 VHTGEQPFHCELCQTFFNRRNALATHYKSKH 399
            .|..::|:.|.:|...|.|...|..|.:..|
  Fly   451 THNDKKPYTCRVCAKGFCRNFDLKKHMRKLH 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..76 CDD:285071
zf-C2H2 260..282 CDD:278523 6/21 (29%)
C2H2 Zn finger 262..282 CDD:275368 6/19 (32%)
C2H2 Zn finger 290..311 CDD:275368 8/20 (40%)
COG5048 <298..>383 CDD:227381 29/84 (35%)
C2H2 Zn finger 319..339 CDD:275368 8/19 (42%)
C2H2 Zn finger 350..370 CDD:275368 7/19 (37%)
ZnF_U1 375..407 CDD:197732 8/25 (32%)
C2H2 Zn finger 378..396 CDD:275368 6/17 (35%)
ermNP_001259891.2 COG5048 <295..461 CDD:227381 53/190 (28%)
C2H2 Zn finger 320..340 CDD:275368 8/27 (30%)
zf-H2C2_2 332..357 CDD:290200 11/37 (30%)
zf-C2H2 346..368 CDD:278523 6/21 (29%)
C2H2 Zn finger 348..368 CDD:275368 6/19 (32%)
zf-H2C2_2 363..385 CDD:290200 6/21 (29%)
C2H2 Zn finger 376..396 CDD:275368 8/20 (40%)
zf-H2C2_2 389..413 CDD:290200 15/24 (63%)
C2H2 Zn finger 404..424 CDD:275368 8/19 (42%)
zf-H2C2_2 416..441 CDD:290200 8/27 (30%)
C2H2 Zn finger 432..452 CDD:275368 7/19 (37%)
C2H2 Zn finger 460..478 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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