DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17806 and CG32767

DIOPT Version :9

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001162674.1 Gene:CG32767 / 31430 FlyBaseID:FBgn0052767 Length:1281 Species:Drosophila melanogaster


Alignment Length:444 Identity:87/444 - (19%)
Similarity:157/444 - (35%) Gaps:134/444 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 EKQGKQEDSD---------------TETA-------------REGGNNRL--------------E 97
            |::.:.||.|               |:||             ..||:.:|              .
  Fly   261 EEEEEDEDDDEELQHGQLEYQISAATQTAGAATSSAAGGAATAGGGSQQLVQLPAGSIVSTTTHR 325

  Fly    98 SRVDVMPISIAQPQRRRILPQRSKKVDG---------VPLKTV--ETPIYPL-VVPEIPPAD--L 148
            ..|.|...::.|.|||.:  ..|..|.|         :|...|  .:|:..| ||.:..||.  :
  Fly   326 LSVPVTEAALVQLQRRPV--YISNAVGGLTAGATYVRMPAAAVISRSPMTVLNVVQQALPATQLI 388

  Fly   149 VDPLRCEDPIQVKSEPQLSSDYPVESMNHEEPASEMPQVMKEEPRTLQVIGEVQKNRRKPRSKGC 213
            :...:.:.|....:|.||:.....:....|:.|.:..|..:::.:..|    .|:.:::.:.:..
  Fly   389 LQTQQQQTPAAAAAEQQLALALEQQRQQQEQQAQQQRQQQQQQEQQRQ----QQQQQQQQQQQQA 449

  Fly   214 LEECPGKDMAKIE---------------------NIDSTTNKTKE-------------------- 237
            .:|...:...:::                     |.:||||.|..                    
  Fly   450 QQEQQRQQQQQLQQQQQQQQTHPVKHSASGSSSTNNNSTTNSTNSNNNTPAATATVTTSYQCVEC 514

  Fly   238 -EKYATRNKWGAAKRAYA----------------------LEHRLYFCDQCGKTFSEKGNFNVHL 279
             ||:.::..:...:..:|                      |..:.|.|..||:....:.||..|:
  Fly   515 VEKFDSKELFDIHRSGHANNMKCAICNMVLKSLKNYEKHCLRCKPYECQICGRVVRFRPNFIKHM 579

  Fly   280 RRHKGTK----EFQCQECDRMEFTQHLLNLHVRIKHRGELPYVCKYCGKRFDNCLKRLNHERNHK 340
            |.|.|.:    :::|:.|.:...:.....:|.:| |...:...|:.|||.|........|.:.|.
  Fly   580 RVHTGQQSERHKYKCEVCHKEFMSFEYFKVHKKI-HNENVNLTCEICGKVFSALASLRGHSKLHS 643

  Fly   341 ESPVHRPHVCSTCQKAFKTSTALKDHIVVHTGEQPFHCELCQTFFNRRNALATH 394
            ...:|:   |..|.|.|.....||.|...|||:.||.|::|:...:.:::|.||
  Fly   644 GVKLHK---CDVCGKGFGQRYNLKIHARTHTGDFPFECKICKKKLHTQSSLQTH 694

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity