DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17806 and gli2

DIOPT Version :10

Sequence 1:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_002943329.3 Gene:gli2 / 100498653 XenbaseID:XB-GENE-481810 Length:1474 Species:Xenopus tropicalis


Alignment Length:482 Identity:89/482 - (18%)
Similarity:155/482 - (32%) Gaps:146/482 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DVLSNILKLTGFWLRNQPG-VPTRICLSCLLDLNDAIAFRERCIRTNSSWFEKQGKQEDSDTETA 88
            :|....||..|.:....|| .||..|....:..:.|..:.|..:                  ::|
 Frog   141 EVAHEHLKERGIFGLAPPGTAPTEYCHQMAILASHASPYGELLV------------------QSA 187

  Fly    89 REGGNNRLESRVDVMPISIAQPQRRRILPQRSKK------------VD----------------- 124
            .....|.......:.|:.:::....|:.|:.|:|            :|                 
 Frog   188 AAAAGNTAHLHEYLTPMDVSRFSSPRVTPRLSRKRALSISPLSDASIDLQTMIRTSPNSLVAYIN 252

  Fly   125 -----------------GV--PLKTVETPIYPLVVPEI-----------PPADLVDPLRCEDPIQ 159
                             |.  |..:...||.|:...::           ..|.|:.|.....|  
 Frog   253 NSRSSSAASGSYGHLSAGAISPAFSFPHPINPVAYQQLLSQQRSLTSSFGHAPLLHPSPTFAP-- 315

  Fly   160 VKSEPQLSSDYPVESMNHEEPASEMPQVMKEEPRTLQVIGEV--QKNRRKPRSKGCLEECPG--- 219
             :.:..|:|..|....|:......:......|......:.:|  ::::.|...:|...:.|.   
 Frog   316 -RQQGALTSANPAPPSNNSSTPDSVLNKGSSESAVSSTVNQVIPKRSKVKMEDEGLQRDSPSPPD 379

  Fly   220 --KDMAKIENIDSTTNKTKEEK---YATRNKWGAAKRAYALEHRL-------------------- 259
              .|:.  |::|.  ::.|:|.   |.|...|......:..:.:|                    
 Frog   380 HLTDLK--EDLDK--DECKQEPDVIYETNCHWDGCSHEFDTQDQLVHHINNDHIHGEKKEFVCRW 440

  Fly   260 YFCDQCGKTFSEKGNFNVHLRRHKGTKEFQC--QECDRMEFTQHLLNLHVRIKHRGELPYVCKY- 321
            :.|.:..|.|..:....||:|||.|.|..:|  :.|.:.......|..|:| .|.||.||||:: 
 Frog   441 HDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCYKAYSRLENLKTHLR-SHTGEKPYVCEHE 504

  Fly   322 -CGKRFDNCLKRLNHE-RNHKESPVHRPHVCST--CQKAFKTSTALKDHI-VVHTGEQPFHCELC 381
             |.|.|.|...|..|: |.|..   .:|::|..  |.|.:...::|:.|: .||..|        
 Frog   505 GCNKAFSNASDRAKHQNRTHSN---EKPYICKIPGCTKRYTDPSSLRKHVKTVHGPE-------- 558

  Fly   382 QTFFNRRNALATHYKSKHHRLKVEEQS 408
                       .|...||....:::.|
 Frog   559 -----------AHVTKKHRNDIIQKPS 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17806NP_650658.1 zf-AD 4..75 CDD:462262 11/50 (22%)
zf-C2H2 260..282 CDD:395048 6/21 (29%)
C2H2 Zn finger 262..282 CDD:275368 6/19 (32%)
C2H2 Zn finger 290..311 CDD:275368 5/22 (23%)
C2H2 Zn finger 319..339 CDD:275368 8/22 (36%)
C2H2 Zn finger 350..370 CDD:275368 5/22 (23%)
ZnF_U1 375..407 CDD:197732 3/31 (10%)
C2H2 Zn finger 378..396 CDD:275368 1/17 (6%)
gli2XP_002943329.3 C2H2 Zn finger 441..463 CDD:275368 6/21 (29%)
SFP1 <465..555 CDD:227516 28/93 (30%)
C2H2 Zn finger 471..493 CDD:275368 5/22 (23%)
C2H2 Zn finger 501..524 CDD:275368 8/22 (36%)
C2H2 Zn finger 532..553 CDD:275368 5/20 (25%)

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