| Sequence 1: | NP_650658.1 | Gene: | CG17806 / 42142 | FlyBaseID: | FBgn0038548 | Length: | 421 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038967290.1 | Gene: | Prdm16 / 100366024 | RGDID: | 2324431 | Length: | 1276 | Species: | Rattus norvegicus |
| Alignment Length: | 285 | Identity: | 66/285 - (23%) |
|---|---|---|---|
| Similarity: | 109/285 - (38%) | Gaps: | 64/285 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 154 CEDPIQVKSEPQLSSDYPVESMNHEEPASEMPQVMKEEPRTLQVIG------------------E 200
Fly 201 VQKNRRKPRSKGC------LEECPGKDMAKIENI----DSTTNKTKEEKYATRNKWGAAKRAYA- 254
Fly 255 LEHRLYFCDQCGKTFSEKGNFNVHLRRHKGTKEFQCQECDRMEFTQHLLNLHVRIKHRGELPYVC 319
Fly 320 KYCGKRFDNCLKRLNHERNHKESPVHRPHVCSTCQKAFKTSTALKDHIVVHTGEQPFHCELCQTF 384
Fly 385 FNRRNALATHYKSKHHRLKVEEQSK 409 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG17806 | NP_650658.1 | zf-AD | 4..75 | CDD:462262 | |
| zf-C2H2 | 260..282 | CDD:395048 | 10/21 (48%) | ||
| C2H2 Zn finger | 262..282 | CDD:275368 | 9/19 (47%) | ||
| C2H2 Zn finger | 290..311 | CDD:275368 | 5/20 (25%) | ||
| C2H2 Zn finger | 319..339 | CDD:275368 | 0/19 (0%) | ||
| C2H2 Zn finger | 350..370 | CDD:275368 | 9/19 (47%) | ||
| ZnF_U1 | 375..407 | CDD:197732 | 9/31 (29%) | ||
| C2H2 Zn finger | 378..396 | CDD:275368 | 5/17 (29%) | ||
| Prdm16 | XP_038967290.1 | PR-SET_PRDM16 | 61..222 | CDD:380990 | 11/45 (24%) |
| C2H2 Zn finger | 232..252 | CDD:275368 | 1/19 (5%) | ||
| zf-C2H2 | 282..304 | CDD:395048 | 3/21 (14%) | ||
| C2H2 Zn finger | 284..304 | CDD:275368 | 3/19 (16%) | ||
| zf-H2C2_2 | 296..320 | CDD:463886 | 8/23 (35%) | ||
| zf-C2H2 | 310..332 | CDD:395048 | 10/21 (48%) | ||
| C2H2 Zn finger | 312..332 | CDD:275368 | 9/19 (47%) | ||
| zf-C2H2 | 338..359 | CDD:395048 | 5/20 (25%) | ||
| C2H2 Zn finger | 340..358 | CDD:275368 | 4/17 (24%) | ||
| zf-C2H2 | 367..389 | CDD:395048 | 10/21 (48%) | ||
| C2H2 Zn finger | 369..389 | CDD:275368 | 9/19 (47%) | ||
| zf-C2H2 | 395..417 | CDD:395048 | 7/22 (32%) | ||
| C2H2 Zn finger | 397..417 | CDD:275368 | 6/20 (30%) | ||
| C2H2 Zn finger | 426..444 | CDD:275368 | 1/2 (50%) | ||
| zf-C2H2 | 952..974 | CDD:395048 | |||
| C2H2 Zn finger | 954..974 | CDD:275368 | |||
| zf-H2C2_2 | 966..990 | CDD:463886 | |||
| SUF4-like | 982..>1016 | CDD:411020 | |||
| C2H2 Zn finger | 982..1008 | CDD:411020 | |||
| C2H2 Zn finger | 982..1003 | CDD:275368 | |||
| zf-C2H2 | 1009..1031 | CDD:395048 | |||
| C2H2 Zn finger | 1011..1031 | CDD:275368 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||