DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and CG18764

DIOPT Version :9

Sequence 1:NP_001303488.1 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_652712.2 Gene:CG18764 / 59239 FlyBaseID:FBgn0042205 Length:409 Species:Drosophila melanogaster


Alignment Length:434 Identity:119/434 - (27%)
Similarity:194/434 - (44%) Gaps:80/434 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 ASKCRTCFRIISRHEDAQDLYDRVNIALLHHIKVITGVWIQQGVKELPHHICSTCQETVNKSMEF 147
            |.:||||..|| .::..::|:...|..:|..|.::||..:... .|||..||:.|...:|:::.|
  Fly     2 ALQCRTCGSII-YNKMPKNLFHIENEKMLQDINLVTGTTLHND-PELPSSICACCTLDLNQAILF 64

  Fly   148 RAKCQQVDKKL---RQTTEKYNIQICDEEMES----------ELENVLYEESAQQAKGVVGLEDF 199
            |.:|....|:|   |::.|........|||.|          |::..:.|...:       :.|.
  Fly    65 RERCILTQKQLVHRRRSPEAKEPAEDVEEMASPPDCLNDPFGEVDEYIVESPEE-------VLDH 122

  Fly   200 SSELLPDSEGVLDEDDFPLDAEPTQFSLSEDELDLDRDTEKDFALEQNKSCNEII-SIRK----- 258
            .|    |:...||||:: :|        |.:::|..:|. .:.|.|.::....:| |::|     
  Fly   123 DS----DAHHDLDEDNY-ID--------SVEDVDALQDM-AEVAEEDSQDVESLISSVQKELESI 173

  Fly   259 CKTKEEIGKVDH----GAKVYKVVLGEY-------------NSLKETAPKYSLSLPKKPQLRV-- 304
            |.........|:    ....:...:.||             .|....:.|.:.:.||:.:..|  
  Fly   174 CNDDSNSDNNDYMEPQNGSYFNETINEYEVSSNPNTPLPESKSAAGRSTKPATTKPKRKKQYVTW 238

  Fly   305 -SPEEKNRRRRERIQAKPLNYVCDKCGHTFRQRSQLQMHLLRHNRAKNFECPECPKKFYDLYTRN 368
             :..|:....|:|:|.| ...||::||..|..:|..::|:|||...|||.|.:|.|:||..:...
  Fly   239 KNMTEEQIIERKRLQRK-RECVCEQCGRQFTDQSNFKLHMLRHTGNKNFACQQCGKRFYTDHLMT 302

  Fly   369 IHVRALHKGEHPFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEGSSRHYCTQCTKSY 433
            :|.|.:|:||.|:.|..|.:||.|:::|..||          ||...:|.  .|.|:|.:|.||.
  Fly   303 LHQRIIHQGEKPYDCRFCTKSFHNSNTRLIHE----------RTHTNAKP--YSCHHCDKCFKSA 355

  Fly   434 TSKKGLVLHMNFHNGSRPFQCKICQMKFADPSAMKRHQALHDKF 477
            :.:|   .|...|.|.|.|.|.||:..|...:.:|.|  |..||
  Fly   356 SGRK---RHELIHTGVRAFACTICKQSFQRNTHLKAH--LRSKF 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_001303488.1 zf-AD 86..160 CDD:214871 24/76 (32%)
COG5048 <323..528 CDD:227381 56/155 (36%)
zf-C2H2 324..346 CDD:278523 8/21 (38%)
C2H2 Zn finger 326..346 CDD:275368 7/19 (37%)
C2H2 Zn finger 354..375 CDD:275368 7/20 (35%)
C2H2 Zn finger 383..401 CDD:275368 7/17 (41%)
C2H2 Zn finger 426..446 CDD:275368 6/19 (32%)
C2H2 Zn finger 454..474 CDD:275368 6/19 (32%)
C2H2 Zn finger 481..501 CDD:275368
C2H2 Zn finger 509..528 CDD:275368
CG18764NP_652712.2 zf-AD 4..75 CDD:214871 23/72 (32%)
C2H2 Zn finger 260..280 CDD:275368 7/19 (37%)
zf-H2C2_2 272..297 CDD:290200 11/24 (46%)
C2H2 Zn finger 288..309 CDD:275368 7/20 (35%)
C2H2 Zn finger 317..337 CDD:275368 9/29 (31%)
C2H2 Zn finger 345..365 CDD:275368 7/22 (32%)
C2H2 Zn finger 373..391 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I8018
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.960

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