DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and zgc:163077

DIOPT Version :9

Sequence 1:NP_001303488.1 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001091655.1 Gene:zgc:163077 / 567932 ZFINID:ZDB-GENE-070521-6 Length:301 Species:Danio rerio


Alignment Length:336 Identity:88/336 - (26%)
Similarity:136/336 - (40%) Gaps:45/336 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 LDEDDFPLDAEPTQFSLSEDELDLDRDTEKDFALE--QNKSCNEIISIRKCKTKEEIGKVDHGAK 273
            ::|:...:..|.|:....||...:...||..|..:  :..:.:|..|..:.||.:      |...
Zfish     3 IEEETCRIKQEETEEQTDEDGDAVSSQTEPTFRHKRAEKTAVHESFSSERGKTYK------HKDS 61

  Fly   274 VYK-----VVLGEYNSLKETAPKYSLSLPKKPQLRVSPEEKNRRRRERIQAKPLNYVCDKCGHTF 333
            :|:     ...|.|     |.|:......:|..||:         ..||......|.|.:||.:|
Zfish    62 LYRHTGFHTGTGLY-----TCPQCGKGFTRKGSLRI---------HTRIHTGERPYTCTQCGKSF 112

  Fly   334 RQRSQLQMHLLRHNRAKNFECPECPKKFYDLYTRNIHVRALHKGEHPFPCNHCNESFANASSRHR 398
            ...|.:..|:..|:|.|.|.|.||.|.|....:.. |.:..|.|..||.|:.|:.:|..|:...|
Zfish   113 IDLSSISKHMRVHSRVKPFTCTECGKSFKHKNSLQ-HHQLTHSGVKPFSCDQCHMTFITAACLKR 176

  Fly   399 HERDVHGAGNRIRTRVKSKEEGSSRHYCTQCTKSYTSKKGLVLHMNFHNGSRPFQCKICQMKFAD 463
            | ..||               ...:.|...|.|||::...|..|...|.|.:|:||..|:..|:.
Zfish   177 H-LPVH---------------ADVKPYMCFCGKSYSAMSILKDHQTVHTGGKPYQCSHCERSFSQ 225

  Fly   464 PSAMKRHQALH-DKFPIRCDICLKGFLLRSQLTKHQDVHTGMHPHRCEICDVHYRHRYNLNKHKN 527
            |..:|.|:..| ::.|..|..|.|.|.....|.:||.:|||..|:.|..|...:....||.:|:.
Zfish   226 PGGLKAHERTHTEEKPYACSDCWKSFGSFCNLKRHQRIHTGEKPYTCSHCGKSFTQSGNLKEHQK 290

  Fly   528 TDLHRDNMQKA 538
            ....:...|::
Zfish   291 IHAGKKQHQRS 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_001303488.1 zf-AD 86..160 CDD:214871
COG5048 <323..528 CDD:227381 64/205 (31%)
zf-C2H2 324..346 CDD:278523 7/21 (33%)
C2H2 Zn finger 326..346 CDD:275368 6/19 (32%)
C2H2 Zn finger 354..375 CDD:275368 6/20 (30%)
C2H2 Zn finger 383..401 CDD:275368 6/17 (35%)
C2H2 Zn finger 426..446 CDD:275368 6/19 (32%)
C2H2 Zn finger 454..474 CDD:275368 6/19 (32%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
C2H2 Zn finger 509..528 CDD:275368 5/18 (28%)
zgc:163077NP_001091655.1 C2H2 Zn finger 53..69 CDD:275368 4/21 (19%)
C2H2 Zn finger 77..97 CDD:275368 5/28 (18%)
zf-H2C2_2 89..112 CDD:290200 8/31 (26%)
C2H2 Zn finger 105..125 CDD:275368 6/19 (32%)
COG5048 <110..279 CDD:227381 57/185 (31%)
C2H2 Zn finger 133..153 CDD:275368 6/20 (30%)
C2H2 Zn finger 161..181 CDD:275368 6/20 (30%)
C2H2 Zn finger 191..208 CDD:275368 6/16 (38%)
C2H2 Zn finger 216..236 CDD:275368 6/19 (32%)
C2H2 Zn finger 244..264 CDD:275368 7/19 (37%)
zf-H2C2_2 256..281 CDD:290200 9/24 (38%)
C2H2 Zn finger 272..292 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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