DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and blf

DIOPT Version :10

Sequence 1:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001012503.1 Gene:blf / 503516 ZFINID:ZDB-GENE-050721-1 Length:478 Species:Danio rerio


Alignment Length:489 Identity:120/489 - (24%)
Similarity:186/489 - (38%) Gaps:130/489 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 LPDSE-GVLDEDDFPLDAEPTQFSLSEDELDLDRDTEKDFALEQNKSCNEIISIRKC--KTKEEI 265
            :.|.| .::|::|.....|.::.|....|::..|...|.....|.||..:.....:|  |...:.
Zfish     1 MSDPETSIMDQEDLSDLMEESEESEEMSEVEKKRRHVKTPKTSQTKSAQKTFKCPQCGKKFARKS 65

  Fly   266 GKVDHGAKVYKVVLGEYN-SLKETAPKYSLSLPKKPQLRVSPEEK---------------NRRRR 314
            |...|    .|:..||.. |.||....:|.|...|..:.:...||               :.:..
Zfish    66 GLTAH----VKIHTGEKPFSCKECGKSFSSSGYIKRHMIIHSGEKPHTCDQCGKSFGLASSLKSH 126

  Fly   315 ERIQAKPLNYVCDKCGHTFRQRSQLQMHLLRHNR---------------------------AKNF 352
            ..:.::...:.||.||.:||..|.|:.||..|.:                           .|||
Zfish   127 AAVHSEEKPFKCDHCGDSFRWLSSLRDHLKTHGKKETHVCSVCGKSFAQLILLKKHKKRHEVKNF 191

  Fly   353 ECPECPKKFYDLYTRNIHVR---ALHKGEHPFPCNHCNESFANASS------------------- 395
            .|.||.|.|    .||..::   .:|.||.|:.|:||::.|:|.||                   
Zfish   192 MCFECGKTF----VRNCELKQHQRVHTGEKPYKCSHCDKRFSNGSSKVVHERIHTGERPYSCDQC 252

  Fly   396 ----RHRHERDVHGAGNRIRTRVKS----------KEEGSSR-----------HYCTQCTKSYTS 435
                ||.|..:.|   .||.|..||          .::.|.|           |.|.||.||:|.
Zfish   253 GHAFRHTHALESH---KRIHTGEKSYTCDQCGKSFTQKASLRIHKKFHNAEKPHTCDQCGKSFTL 314

  Fly   436 KKGLVLHMNFHNGSRPFQCKICQMKFADPSAMKRHQALHDKF-PIRCDICLKGFLLRSQLTKHQD 499
            |..|..||..|.|.:|..|..|..:|:..|.:|.|.|.|... |.||:.|.|||...|.|..|..
Zfish   315 KTSLNEHMKIHTGEKPHTCDQCGKRFSRLSLLKLHLATHSVIRPYRCEKCGKGFTWESCLKNHLK 379

  Fly   500 VHTGMHPHRCEICDVHYRHRYNLNKH--KNTDLHRDNM------------QKAIKEEVNGLQQAF 550
            .|:...||:|.:|...:|...:|..|  ::|.: :::|            :..:.::|:...:.:
Zfish   380 THSEEKPHKCSVCGKGFRLANSLRSHQKRHTGV-KNHMCFDCGKTYFTKNELKLHQKVHSGGEFY 443

  Fly   551 KDIDKEMDFESQTPMQPNAQEVRARTQDEKTQTI 584
            |.:..:|.|:....::          ..|||.|:
Zfish   444 KCLHCDMTFKRLDYVK----------NHEKTHTV 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_650657.2 zf-AD 86..160 CDD:214871
SUF4-like 320..>376 CDD:411020 21/85 (25%)
C2H2 Zn finger 323..351 CDD:411020 11/54 (20%)
C2H2 Zn finger 326..346 CDD:275368 10/19 (53%)
C2H2 Zn finger 354..375 CDD:411020 7/23 (30%)
C2H2 Zn finger 354..375 CDD:275368 7/23 (30%)
C2H2 Zn finger 383..401 CDD:275368 10/40 (25%)
C2H2 Zn finger 426..446 CDD:275368 10/19 (53%)
C2H2 Zn finger 454..474 CDD:275368 7/19 (37%)
C2H2 Zn finger 481..501 CDD:275368 8/19 (42%)
C2H2 Zn finger 509..528 CDD:275368 5/20 (25%)
blfNP_001012503.1 COG5048 38..466 CDD:227381 111/449 (25%)
C2H2 Zn finger 54..74 CDD:275368 5/23 (22%)
C2H2 Zn finger 82..102 CDD:275368 5/19 (26%)
C2H2 Zn finger 110..130 CDD:275368 0/19 (0%)
C2H2 Zn finger 138..158 CDD:275368 10/19 (53%)
C2H2 Zn finger 166..186 CDD:275368 0/19 (0%)
C2H2 Zn finger 193..213 CDD:275368 7/23 (30%)
C2H2 Zn finger 221..241 CDD:275368 7/19 (37%)
C2H2 Zn finger 249..269 CDD:275368 5/22 (23%)
C2H2 Zn finger 277..297 CDD:275368 2/19 (11%)
C2H2 Zn finger 305..325 CDD:275368 10/19 (53%)
C2H2 Zn finger 333..353 CDD:275368 7/19 (37%)
C2H2 Zn finger 361..381 CDD:275368 8/19 (42%)
C2H2 Zn finger 389..409 CDD:275368 5/19 (26%)
C2H2 Zn finger 417..437 CDD:275368 0/19 (0%)
C2H2 Zn finger 445..465 CDD:275368 4/29 (14%)
Blue background indicates that the domain is not in the aligned region.

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