DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and grau

DIOPT Version :10

Sequence 1:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_788422.1 Gene:grau / 45871 FlyBaseID:FBgn0001133 Length:570 Species:Drosophila melanogaster


Alignment Length:585 Identity:122/585 - (20%)
Similarity:217/585 - (37%) Gaps:149/585 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 CRTCFRIISRHEDAQDLYD------RVNIALLHHIKVITGVWIQQGVKELPHH-----ICSTCQE 139
            ||.|.|.:|..:....::|      :|...|..|.      |.:    .||:.     ||:.|..
  Fly     4 CRLCLRGVSGAQMCLQIFDVDSGESKVAEVLRQHF------WFE----VLPNDEISKVICNVCWT 58

  Fly   140 TVNKSMEFRAKCQQVDKKLRQTTEKYNIQICDEEMESELENVLYEESAQQAKGVVGLE-DFSSEL 203
            .|::..:|....|:. :.:..||.|:       :.:.|:.|..:.|.......|:.:: |..:::
  Fly    59 QVSEFHQFYVSIQEA-QVIYATTSKF-------KQDPEMVNTSWPEEVLMPADVLAVDNDVGAQI 115

  Fly   204 LPDSEGVLDEDDF--PLDAEPTQFSLSED------EL---DLDRDTEKDFALEQNKSCNEIISIR 257
               :...|||.|.  |:..|.::..:..:      ||   |.:.:.::|:..:::...:::|..|
  Fly   116 ---NVNPLDELDLSQPMSPEDSKVGIKTERQSPDMELLFEDANNEQDEDYEDDEDDDTDDLIVTR 177

  Fly   258 K-----------CKTKEEIGKVDHGAK--------------VYK------------------VVL 279
            .           .|||.  |.|..|.|              ::|                  :|:
  Fly   178 SGRKRKRDVAKPAKTKR--GTVSVGRKGKEKMVVKRGPPKRIFKMERLPPFCKEDEELIKRYIVM 240

  Fly   280 G---------EYNSLKETAPKYSLSLP-KKPQLRVSPEEKNRR----RRERIQAKPLNYVCDKCG 330
            |         :::.::|   .:....| ::|.::....:.|:|    ...|....|....|..||
  Fly   241 GCELCIFLAEDFDGIRE---HFKDKHPDERPYIKCCGRKLNKRCLIQEHARRHENPEYIKCKDCG 302

  Fly   331 HTFRQRSQLQMHLLRH---NRAKNFECPECPKKFYDLYTRNIHVRALHKGEH------PFPCNHC 386
            ..|...|.|:.|.|.|   :...:|:|.:|.|:|   ..||:  ..||||.|      .|.|..|
  Fly   303 KVFANSSVLRAHWLVHHVPDEECDFQCEDCGKRF---SRRNL--LELHKGSHVPVNERKFICPQC 362

  Fly   387 --NESFA-------NASSRHRHERDV-HGAGNRIRTRVKSK-------EEGSSRHYCTQ--CTKS 432
              :.:||       :.|.:||...:: |..|.:|:.:...:       ||...|..|.:  |...
  Fly   363 PKHNAFATEYHMQVHISMQHRKAANICHVCGKKIKDKAVFEKHVRLHFEESGPRIKCPRPDCESW 427

  Fly   433 YTSKKGLVLHMNFHNG-SRPFQCKICQMKFADPSAMKRHQAL-HDKFPIRCDICLKGFLLRSQLT 495
            ...:..|..|:..||. .:.|.|..|.....:..|:..|:.. |......|:.|.|.|.....|.
  Fly   428 LKDEDNLKQHLRRHNDEGKLFICSECGKSCKNSRALIGHKRYSHSNVIYTCEQCGKTFKKDISLK 492

  Fly   496 KHQDVHTGMHPHRCEICDVHYRHRYNLNKHKNT------DLHRDNMQKAIKEEVNGLQ--QAFKD 552
            :|...|||...::|..|...:....|::.||..      |:.|.....:.::.:...|  |.|:|
  Fly   493 EHMAQHTGEPLYKCPFCPRTFNSNANMHSHKKKMHPVEWDIWRKTKTGSSQKVLPSAQVAQMFRD 557

  Fly   553  552
              Fly   558  557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_650657.2 zf-AD 86..160 CDD:214871 18/84 (21%)
SUF4-like 320..>376 CDD:411020 18/58 (31%)
C2H2 Zn finger 323..351 CDD:411020 9/30 (30%)
C2H2 Zn finger 326..346 CDD:275368 8/19 (42%)
C2H2 Zn finger 354..375 CDD:411020 6/20 (30%)
C2H2 Zn finger 354..375 CDD:275368 6/20 (30%)
C2H2 Zn finger 383..401 CDD:275368 7/26 (27%)
C2H2 Zn finger 426..446 CDD:275368 4/21 (19%)
C2H2 Zn finger 454..474 CDD:275368 4/20 (20%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
C2H2 Zn finger 509..528 CDD:275368 5/18 (28%)
grauNP_788422.1 zf-AD 3..74 CDD:462262 18/80 (23%)
C2H2 Zn finger 272..290 CDD:275368 3/17 (18%)
COG5048 <296..453 CDD:227381 43/161 (27%)
C2H2 Zn finger 298..318 CDD:275368 8/19 (42%)
C2H2 Zn finger 329..349 CDD:275368 10/24 (42%)
C2H2 Zn finger 359..409 CDD:275368 10/49 (20%)
C2H2 Zn finger 360..378 CDD:275370 3/17 (18%)
zf-C2H2_8 419..502 CDD:464935 21/82 (26%)
C2H2 Zn finger 450..471 CDD:275368 4/20 (20%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
C2H2 Zn finger 506..524 CDD:275368 4/17 (24%)

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