DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and Sry-delta

DIOPT Version :10

Sequence 1:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster


Alignment Length:537 Identity:106/537 - (19%)
Similarity:180/537 - (33%) Gaps:163/537 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 FLAEADDSDATCTTSTALDTTTADSAFFDSDFEEESTGLQEC-----DPPPASK-CRTCFRIISR 95
            |....|.||...::|...:|.:|.............|.|..|     |..|.:: |..||:.:|.
  Fly     6 FCGAVDLSDTGSSSSMRYETLSAKVPSSQKTVSLVLTHLANCIQTQLDLKPGARLCPRCFQELSD 70

  Fly    96 HEDAQDLYDRVNIALLHHIKVITGVWIQQGVKELPHHICSTCQETVNKSMEFRAKCQQVDKKLRQ 160
                   ||.:.:.|:                            |..|               |.
  Fly    71 -------YDTIMVNLM----------------------------TTQK---------------RL 85

  Fly   161 TTEKYNIQICDEEMESELENVLYEESAQQAKGVVGLEDFSSELLPDSEGVLDEDDFPLDAEPTQF 225
            ||:.......:.|:....|::|.||..                :|.|:...|.|   .:|:....
  Fly    86 TTQLKGALKSEFEVPESGEDILVEEVE----------------IPQSDVETDAD---AEADALFV 131

  Fly   226 SLSEDELDLDRDTEKDFALEQNKSCNEIISIRKCKTKEEIGKVDHGAKVYKVVLGEYNSLKETAP 290
            .|.:|:.:.|.:.:::|..|:               :||....|.......|.:|:..:|     
  Fly   132 ELVKDQEESDTEIKREFVDEE---------------EEEDDDDDDEFICEDVDVGDSEAL----- 176

  Fly   291 KYSLSLPKKPQLRVSPEEKNRRRRERIQAKPLNYVCDKCGHTFRQRSQLQMHLL-RHNRAKNFEC 354
             |.          .|.:.::|..::|::.:     |..||..:....|||.|:. .|::..|..|
  Fly   177 -YG----------KSSDGEDRPTKKRVKQE-----CTTCGKVYNSWYQLQKHISEEHSKQPNHIC 225

  Fly   355 PECPKKFYDLYTRNIHVRALHKGEHPFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEE 419
            |.|     .:..|:.....||...|                                       |
  Fly   226 PIC-----GVIRRDEEYLELHMNLH---------------------------------------E 246

  Fly   420 GSSRHYCTQCTKSYTSKKGLVLHMNFHNGSRPFQCKICQMKFADPSAMKRHQALH--DKFPIRCD 482
            |.:...|..|.||::.....:.||..|...:.:||:.|.::|:..:.:..|:..|  ::.||.|.
  Fly   247 GKTEKQCRYCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLRFSQDNLLYNHRLRHEAEENPIICS 311

  Fly   483 ICLKGFLLRSQLTKHQDVHTGMHP-HRCEICDVHYRHRYNLNKHKNTDLHRDNMQKAIKEEVNG- 545
            ||...|..|.....|..:|....| |.|.:|...:..||.|..|..|  |..::...::||... 
  Fly   312 ICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTERYTLKMHMKT--HEGDVVYGVREEAPAD 374

  Fly   546 LQQAFKDIDKEMDFESQ 562
            .||..:::..::| ||:
  Fly   375 EQQVVEELHVDVD-ESE 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_650657.2 zf-AD 86..160 CDD:214871 9/73 (12%)
SUF4-like 320..>376 CDD:411020 14/56 (25%)
C2H2 Zn finger 323..351 CDD:411020 8/28 (29%)
C2H2 Zn finger 326..346 CDD:275368 7/20 (35%)
C2H2 Zn finger 354..375 CDD:411020 4/20 (20%)
C2H2 Zn finger 354..375 CDD:275368 4/20 (20%)
C2H2 Zn finger 383..401 CDD:275368 0/17 (0%)
C2H2 Zn finger 426..446 CDD:275368 6/19 (32%)
C2H2 Zn finger 454..474 CDD:275368 4/19 (21%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
C2H2 Zn finger 509..528 CDD:275368 6/18 (33%)
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 46/200 (23%)
C2H2 Zn finger 225..245 CDD:275368 6/24 (25%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
C2H2 Zn finger 281..301 CDD:275368 4/19 (21%)
C2H2 Zn finger 310..327 CDD:275370 5/16 (31%)
C2H2 Zn finger 339..359 CDD:275368 7/21 (33%)

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