DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and CG17806

DIOPT Version :10

Sequence 1:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster


Alignment Length:444 Identity:116/444 - (26%)
Similarity:184/444 - (41%) Gaps:94/444 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 CRTCFRIISRHEDAQDLYDRVNIALLHHIKVITGVWI--QQGVKELPHHICSTCQETVNKSMEFR 148
            ||||.:   ..|.|:.|:|:....:|.:|..:||.|:  |.||   |..||.:|...:|.::.||
  Fly     5 CRTCGQ---EAEHAKSLFDKEARDVLSNILKLTGFWLRNQPGV---PTRICLSCLLDLNDAIAFR 63

  Fly   149 AKC------------QQVDKKLRQTTEKYNIQICDEEMESELE------------NVLYEESAQQ 189
            .:|            :|.|.......|..|     ..:||.::            .:|    .|:
  Fly    64 ERCIRTNSSWFEKQGKQEDSDTETAREGGN-----NRLESRVDVMPISIAQPQRRRIL----PQR 119

  Fly   190 AKGVVG--LEDFSSELLPDSEGVLDEDDF--PLDAE-PTQFSLSEDELDLDRDTEKDFALEQNKS 249
            :|.|.|  |:...:.:.|.....:...|.  ||..| |.|.. ||.:|..|...|   ::...:.
  Fly   120 SKKVDGVPLKTVETPIYPLVVPEIPPADLVDPLRCEDPIQVK-SEPQLSSDYPVE---SMNHEEP 180

  Fly   250 CNEIISIRK--CKTKEEIGKVDHGAKVYKVVLGEYNSLKETAPKYSLSLPKKPQLRV-------- 304
            .:|:..:.|  .:|.:.||:|            :.|..|..:.......|.|...::        
  Fly   181 ASEMPQVMKEEPRTLQVIGEV------------QKNRRKPRSKGCLEECPGKDMAKIENIDSTTN 233

  Fly   305 -SPEEKNRRRRERIQAKPLN------YVCDKCGHTFRQRSQLQMHLLRHNRAKNFECPECPKKFY 362
             :.|||...|.:...||...      |.||:||.||.::....:||.||...|.|:|.||.:..:
  Fly   234 KTKEEKYATRNKWGAAKRAYALEHRLYFCDQCGKTFSEKGNFNVHLRRHKGTKEFQCQECDRMEF 298

  Fly   363 DLYTRNIHVRALHKGEHPFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEGSSR-HYC 426
            ..:..|:|||..|:||.|:.|.:|.:.|.|...|..|||:             .||....| |.|
  Fly   299 TQHLLNLHVRIKHRGELPYVCKYCGKRFDNCLKRLNHERN-------------HKESPVHRPHVC 350

  Fly   427 TQCTKSYTSKKGLVLHMNFHNGSRPFQCKICQMKFADPSAMKRH-QALHDKFPI 479
            :.|.|::.:...|..|:..|.|.:||.|::||..|...:|:..| ::.|.:..:
  Fly   351 STCQKAFKTSTALKDHIVVHTGEQPFHCELCQTFFNRRNALATHYKSKHHRLKV 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_650657.2 zf-AD 86..160 CDD:214871 26/87 (30%)
SUF4-like 320..>376 CDD:411020 21/61 (34%)
C2H2 Zn finger 323..351 CDD:411020 11/33 (33%)
C2H2 Zn finger 326..346 CDD:275368 8/19 (42%)
C2H2 Zn finger 354..375 CDD:411020 7/20 (35%)
C2H2 Zn finger 354..375 CDD:275368 7/20 (35%)
C2H2 Zn finger 383..401 CDD:275368 6/17 (35%)
C2H2 Zn finger 426..446 CDD:275368 5/19 (26%)
C2H2 Zn finger 454..474 CDD:275368 6/20 (30%)
C2H2 Zn finger 481..501 CDD:275368
C2H2 Zn finger 509..528 CDD:275368
CG17806NP_650658.1 zf-AD 4..75 CDD:462262 24/75 (32%)
zf-C2H2 260..282 CDD:395048 9/21 (43%)
C2H2 Zn finger 262..282 CDD:275368 8/19 (42%)
C2H2 Zn finger 290..311 CDD:275368 7/20 (35%)
C2H2 Zn finger 319..339 CDD:275368 8/32 (25%)
C2H2 Zn finger 350..370 CDD:275368 5/19 (26%)
ZnF_U1 375..407 CDD:197732 9/30 (30%)
C2H2 Zn finger 378..396 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

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