DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and M1BP

DIOPT Version :10

Sequence 1:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster


Alignment Length:511 Identity:112/511 - (21%)
Similarity:202/511 - (39%) Gaps:139/511 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 SKCRTCFRIISRHEDAQDLYDRVNIALLHHIKVITGVWIQQ-GVKELPHHICSTCQETVNKSMEF 147
            |.||.|.:..| ::.:..|::|.|..::.:|:.:||:.::. |.  ||..||..|...:..:::.
  Fly    11 STCRVCAKYAS-NKRSPKLFERSNTKMIDNIEALTGLRLENYGC--LPDQICECCSMELASAVKL 72

  Fly   148 RAKCQQVDKKL--------RQTTEKYN---------IQIC----DEEMESELENVLYEESAQQAK 191
            |.:|....::|        ||....:.         :|..    |:|:.:..:.::.||..::  
  Fly    73 RERCIAAQRELLLGLTEEQRQGISAFYRAAVMGEDIVQTVKTPDDDEVYATYQEIVLEEPKEE-- 135

  Fly   192 GVVGLED----FSSELLPDSEGVLDEDDFPLDAEPTQFS--LSEDE-----LDLDRDTEKDFALE 245
                ::|    :.:.....:||...|||.....|...:.  ::|||     |:||.|||      
  Fly   136 ----IDDTKVEYDNTYYEVAEGHAGEDDAASLIEEADYDSIMAEDEEQQQTLELDEDTE------ 190

  Fly   246 QNKSCNEIISIRKCKTKEEIGKVDHGAKVYKVVLGEYNSLKETAPKYSLSLPKKPQLRVSPEEKN 310
              ....::.......:.:|:..:|:      |:..||.  .|.......|||.||::|  .::..
  Fly   191 --LIVGDVNDAYVYDSDDEVAVLDN------VLDDEYE--HENIVVKKCSLPPKPKVR--SDDAR 243

  Fly   311 RRRRERIQAKPLNYVCDKCGHTFRQRSQLQMHLLRHNRAKNFECPECPKKFYDLYTRNIHVRALH 375
            ||....:      |:|::||:..:.|...::|..||...|.|.|..|..:|........|:|. |
  Fly   244 RRGTGGV------YICEQCGNHIKGRMAFELHCRRHRGDKQFGCELCQSRFCTTSELKRHMRK-H 301

  Fly   376 KGEHPFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEGSSRHYCTQCTKSYTSKKGLV 440
            .||.||.|.:|...|.:.::|.:|||.                                      
  Fly   302 TGERPFACKYCGRCFTDYTTRVKHERT-------------------------------------- 328

  Fly   441 LHMNFHNGSRPFQCKICQMKFADPSAMKRHQALHDKFPIRCDICLKGFLLRSQLTKHQDVHTGMH 505
                 |...||:.|..|...|.                       .|::|::    |..:|:|..
  Fly   329 -----HTNERPYVCGTCGKAFT-----------------------TGYILKN----HMLIHSGER 361

  Fly   506 PHRCEICDVHYRHRYNLNKHKNTDLHRDNMQKAIKEEVNGLQQAFKDIDKEMDFES 561
            .:|||:||..:....:|:.|..:.:|:.:::||..::|  |:|..|...||.:.:|
  Fly   362 AYRCELCDKSFMLPTHLSTHFRSGVHKRHLEKAEMKQV--LEQEQKRELKEEEEDS 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_650657.2 zf-AD 86..160 CDD:214871 19/82 (23%)
SUF4-like 320..>376 CDD:411020 15/55 (27%)
C2H2 Zn finger 323..351 CDD:411020 8/27 (30%)
C2H2 Zn finger 326..346 CDD:275368 5/19 (26%)
C2H2 Zn finger 354..375 CDD:411020 5/20 (25%)
C2H2 Zn finger 354..375 CDD:275368 5/20 (25%)
C2H2 Zn finger 383..401 CDD:275368 5/17 (29%)
C2H2 Zn finger 426..446 CDD:275368 0/19 (0%)
C2H2 Zn finger 454..474 CDD:275368 3/19 (16%)
C2H2 Zn finger 481..501 CDD:275368 3/19 (16%)
C2H2 Zn finger 509..528 CDD:275368 6/18 (33%)
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 18/73 (25%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
COG5048 276..>331 CDD:227381 20/98 (20%)
C2H2 Zn finger 281..301 CDD:275368 5/20 (25%)
zf-H2C2_2 293..317 CDD:463886 9/24 (38%)
C2H2 Zn finger 309..329 CDD:275368 7/62 (11%)
zf-H2C2_2 324..346 CDD:463886 9/87 (10%)
C2H2 Zn finger 337..357 CDD:275368 6/46 (13%)
zf-H2C2_2 350..372 CDD:463886 9/25 (36%)
C2H2 Zn finger 365..383 CDD:275368 6/17 (35%)

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