DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and CG11247

DIOPT Version :10

Sequence 1:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:369 Identity:95/369 - (25%)
Similarity:152/369 - (41%) Gaps:94/369 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 VGLEDFSSELLPDSEGVLDEDDFPLDAEPTQFSLSEDELDLDRDTEKDFALEQNKSCNEIISIR- 257
            |..||..| ||.|| |:               |||......:.......|:::.||  .:.|:| 
  Fly     8 VSKEDAVS-LLTDS-GI---------------SLSSPPAARESSPGPTLAIKRRKS--SLASLRD 53

  Fly   258 KCKTKEEIGKVDHGAKVYKVVLGEYNSLKETAPKYSLSLPKKPQLRVSPEEKNRRRRERIQAKPL 322
            .|..:||    |.|        ||.:|..:..        .:|||:     |:.|:.|.::.|  
  Fly    54 ACVDEEE----DDG--------GEQDSKDDDY--------VQPQLK-----KSARKGEPVKRK-- 91

  Fly   323 NYVCDKCGHTFRQRSQLQMHLL-----------------------------RHNRAKNFECPECP 358
            ::||.:|...|..::.||.|:|                             .|...|.|.|.:||
  Fly    92 HHVCSQCSKEFGGKTDLQRHMLIHSDERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCP 156

  Fly   359 KKFYDLYTRNIHVRALHKGEHPFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEGSSR 423
            |.|.......:|:| ||.||.|:||:.|::.||......:|....|      :|.::       :
  Fly   157 KSFALKERLRLHMR-LHSGEKPYPCDLCDKKFARGGQLQQHMVSHH------KTSIQ-------Q 207

  Fly   424 HYCTQCTKSYTSKKGLVLHMNFHNGSRPFQCKICQMKFADPSAMKRH--QALHDKFPIRCDICLK 486
            ..||:|:.|:::...|.:||..|......:|.||:.:||:..|::.|  |..|......|:||.|
  Fly   208 FNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQFANELALRAHINQEHHKLTQFECEICHK 272

  Fly   487 GFLLRSQLTKHQDVHTGMHPHRCEICDVHY--RHRYNLNKHKNT 528
            .......|..|...||.:..|.||:|:.::  :.:||::...:|
  Fly   273 MIEPDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHMRMHT 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_650657.2 zf-AD 86..160 CDD:214871
SUF4-like 320..>376 CDD:411020 20/84 (24%)
C2H2 Zn finger 323..351 CDD:411020 9/56 (16%)
C2H2 Zn finger 326..346 CDD:275368 7/48 (15%)
C2H2 Zn finger 354..375 CDD:411020 7/20 (35%)
C2H2 Zn finger 354..375 CDD:275368 7/20 (35%)
C2H2 Zn finger 383..401 CDD:275368 5/17 (29%)
C2H2 Zn finger 426..446 CDD:275368 7/19 (37%)
C2H2 Zn finger 454..474 CDD:275368 8/21 (38%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
C2H2 Zn finger 509..528 CDD:275368 5/20 (25%)
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 44/174 (25%)
C2H2 Zn finger 95..115 CDD:275368 7/19 (37%)
C2H2 Zn finger 123..144 CDD:275368 0/20 (0%)
C2H2 Zn finger 152..172 CDD:275368 7/20 (35%)
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
COG5048 <192..369 CDD:227381 35/138 (25%)
C2H2 Zn finger 210..230 CDD:275370 7/19 (37%)
C2H2 Zn finger 238..260 CDD:275371 8/21 (38%)
C2H2 Zn finger 267..287 CDD:275368 6/19 (32%)
C2H2 Zn finger 295..315 CDD:275368 5/19 (26%)
C2H2 Zn finger 323..343 CDD:275368
C2H2 Zn finger 351..374 CDD:275368
C2H2 Zn finger 382..399 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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