DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and CG15710

DIOPT Version :10

Sequence 1:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_611122.1 Gene:CG15710 / 36832 FlyBaseID:FBgn0034120 Length:265 Species:Drosophila melanogaster


Alignment Length:232 Identity:42/232 - (18%)
Similarity:80/232 - (34%) Gaps:56/232 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 NRAKNFECPECPKKFYDLYTRNIHVRALHK------------GEHPFPCNHCNESFANASSRHRH 399
            :..:.|.||.|...........:|:.|..:            .:|  .||.|.:.|::..:...|
  Fly    48 DNTQRFHCPLCSNVIRTAGAYKVHLMACQRRLARMMKDVPDVSQH--QCNICKKIFSSVDALIGH 110

  Fly   400 ERDVHGAGNRIRTRVKSKEEGSSRHYCTQCTKSYTSKKGLVLHMNFH-----------NG----S 449
             |.:||:.:..||             |..|...:.:......|:..|           .|    :
  Fly   111 -RLLHGSPSMNRT-------------CASCHVKFGTDLEYRTHLESHLIPCESTDESYEGAYTIT 161

  Fly   450 RPFQCKICQMKFA---DPSAMKRHQALHDKFPIRCDICLKGFLLRSQLTKHQDVHTGMHPHRCEI 511
            :.|.|..|:.:|.   .|..:.|..|        ||.|:  ..|::|..:.:.:........|:.
  Fly   162 KTFNCVFCRTEFKACFKPGQVTRRYA--------CDACI--VRLKAQEEEKKILGKRRPELICDR 216

  Fly   512 CDVHYRHRYNLNKHKNTDLHRDNMQKAIKEEVNGLQQ 548
            |...|::...|::|..|....|..::..:.|:..:.:
  Fly   217 CGKKYKYEGFLHRHLKTCQMPDKCKRKREIEITEVSE 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_650657.2 zf-AD 86..160 CDD:214871
SUF4-like 320..>376 CDD:411020 6/28 (21%)
C2H2 Zn finger 323..351 CDD:411020 0/3 (0%)
C2H2 Zn finger 326..346 CDD:275368
C2H2 Zn finger 354..375 CDD:411020 5/20 (25%)
C2H2 Zn finger 354..375 CDD:275368 5/20 (25%)
C2H2 Zn finger 383..401 CDD:275368 5/17 (29%)
C2H2 Zn finger 426..446 CDD:275368 3/19 (16%)
C2H2 Zn finger 454..474 CDD:275368 6/22 (27%)
C2H2 Zn finger 481..501 CDD:275368 5/19 (26%)
C2H2 Zn finger 509..528 CDD:275368 5/18 (28%)
CG15710NP_611122.1 None
Blue background indicates that the domain is not in the aligned region.

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