DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and CG8089

DIOPT Version :10

Sequence 1:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_611014.1 Gene:CG8089 / 36679 FlyBaseID:FBgn0033993 Length:624 Species:Drosophila melanogaster


Alignment Length:593 Identity:126/593 - (21%)
Similarity:205/593 - (34%) Gaps:176/593 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 PAS---KCRTC--FRIISRHEDAQDLYDRVNIALLHHIKVITGVWIQQGVKELPHHICSTCQETV 141
            |||   ||:.|  ||         :.|    :|.....:.|.|.       :....:|    |.|
  Fly    31 PASCHCKCKCCRGFR---------EKY----VAFNGEGETIFGT-------DFSSELC----EDV 71

  Fly   142 NKSMEFR------------------------AKCQQVDKKLRQTTEKYNIQICDEEMESELENVL 182
            .|.|.||                        |..|...:.:....|:.|.::..|::.:.|:.|.
  Fly    72 QKIMRFRSSDMLLLLRTAQLRDNFWTNEYFKADLQDDFRAIFDAFEEKNRKVQLEKLAAILDTVS 136

  Fly   183 --YEESAQQAKGVVGLEDFSSELLPDSEGV----LDEDDFPLDAEPTQFSLSEDELDLDRDTEKD 241
              |..|..|..|    ::....|.|....:    |..|.:..:..|.: .|.:.|     |.:|.
  Fly   137 SGYRRSVSQLAG----QEAHGALRPKIAALFLPGLRCDCYKCENLPWK-KLQDVE-----DHQKT 191

  Fly   242 FALEQNKSC----------NEIIS--IRKCKTKEEIGKVDHGAKVYKVVLGEYNSLKETAPKYSL 294
            .....|..|          :.:.|  |||..:..|:    |..|.||.:|....|.:|...:.||
  Fly   192 HRYSDNFHCQICYRRFYLQHSLTSHIIRKSTSSREL----HENKRYKRLLENQKSQEEKELELSL 252

  Fly   295 S------LPKKPQLRVSPEEKNRRRRERIQAKPLNYVCDKCGHTFRQRSQLQMHLLRHNRAK--- 350
            :      :|....|:...:::::...::.:...|: .|..|...:......|:|:::|.|.:   
  Fly   253 NKVEDILVPVAEDLQSYFKDESKHPIQKRKTSSLS-KCPSCAQNYGFSFSHQLHMVKHRRERLYT 316

  Fly   351 --NFECPECPKKFYDLYTRNIHVRALHKGE-----------HPFPCNHCNESFANASSRHRHERD 402
              .|.|..|.:.|   .||    :.|.|.:           .||.|.||...|...|:...|...
  Fly   317 NFPFHCSFCNRSF---LTR----KFLRKHQQRVRTFSTLLYRPFKCPHCTWRFQLKSALDSHVLR 374

  Fly   403 VHGAGNRIRTRVKSKEEGSSRHYC--------TQCTKSYTSKKGLVLHMNFHNGSRPFQ------ 453
            :|                ..|..|        ..|..::|||:.......:.:..||.:      
  Fly   375 IH----------------ERRKPCLICKLPTSRLCCSAHTSKECNRAMQKYRDKMRPLREPPKGG 423

  Fly   454 --------CKICQMKFADPSAMKRH--QALHDKFPIRCDICLKGFLLRSQLTKHQD-VHTGMHPH 507
                    ||||..||.....::.|  :|..:|....|:||...|..:..:..|:. ||..:|..
  Fly   424 CRKQPTPVCKICNRKFTRKFFLEEHMNKAHLNKRNFTCEICGANFYSQGTMQTHRKAVHLLVHTV 488

  Fly   508 RCEICDVHYRHRYNLNKHKNTDLHRDNMQKAIKEEVNGLQQAFKDIDKEMDFESQTPMQPNAQEV 572
            :||:||:..:.:.|..:|..:..|:||:.|..|..           ||..|         :.:..
  Fly   489 QCEVCDLTIKSKGNYRRHCKSQSHKDNLVKFGKNN-----------DKTKD---------SNRRK 533

  Fly   573 RARTQDEK 580
            .|||.|||
  Fly   534 GARTTDEK 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_650657.2 zf-AD 86..160 CDD:214871 17/99 (17%)
SUF4-like 320..>376 CDD:411020 14/60 (23%)
C2H2 Zn finger 323..351 CDD:411020 6/32 (19%)
C2H2 Zn finger 326..346 CDD:275368 4/19 (21%)
C2H2 Zn finger 354..375 CDD:411020 5/20 (25%)
C2H2 Zn finger 354..375 CDD:275368 5/20 (25%)
C2H2 Zn finger 383..401 CDD:275368 6/17 (35%)
C2H2 Zn finger 426..446 CDD:275368 5/27 (19%)
C2H2 Zn finger 454..474 CDD:275368 8/21 (38%)
C2H2 Zn finger 481..501 CDD:275368 5/20 (25%)
C2H2 Zn finger 509..528 CDD:275368 6/18 (33%)
CG8089NP_611014.1 C2H2 Zn finger 289..309 CDD:275368 4/19 (21%)
SUF4-like 322..>376 CDD:411020 15/60 (25%)
C2H2 Zn finger 322..352 CDD:411020 7/36 (19%)
C2H2 Zn finger 322..343 CDD:275368 7/27 (26%)
C2H2 Zn finger 355..376 CDD:411020 6/20 (30%)
C2H2 Zn finger 355..376 CDD:275368 6/20 (30%)
C2H2 Zn finger 432..453 CDD:275368 7/20 (35%)
C2H2 Zn finger 461..486 CDD:275368 7/24 (29%)
C2H2 Zn finger 490..506 CDD:275368 5/15 (33%)

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