DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and zf30C

DIOPT Version :10

Sequence 1:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster


Alignment Length:631 Identity:127/631 - (20%)
Similarity:202/631 - (32%) Gaps:222/631 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 PPPASKCRTCFRIISRHEDAQDLYDRVNIALLHHIKVITGVWIQQGVKELPHHICSTC------Q 138
            ||...:||.|        ||:..::.   .|..|.|...||......:|....:|..|      |
  Fly    55 PPGGFECRHC--------DARFCHEE---ELTQHAKDEHGVTGAVAGQERKPFVCEKCGAEYKYQ 108

  Fly   139 ETVNKSMEFRAKCQQVDKKLRQTTEKYNIQIC--------------------------------- 170
            |...:  ..|.||.: :|..|:.:.....:.|                                 
  Fly   109 EAYRR--HCRTKCGE-EKLPREESRPMECKCCYTRFSSASNLSKHRRSRPDTCGQPEYDSPGSSD 170

  Fly   171 -----------DEEMESELENVLYEESAQQAKGVVGLEDFSSELLPDSEGVLDEDDFPLDAEPTQ 224
                       |...:|:.|:...|||......:.......::|..:|:.....|:.| |.||..
  Fly   171 GMKKHKAFRKKDRNRDSDDEDTTSEESEDSDDDIPLASRLKTKLKQESQNSDSGDECP-DFEPNN 234

  Fly   225 FSLSEDELD-------------LDRDTEKD-----------------FALEQNKSCNEIIS---- 255
               |||:.|             ::...|:|                 |:.|::|..:.:::    
  Fly   235 ---SEDDADASGFQLPPPAMVKVEAFDEEDFEYQDASMYVKTESTDIFSNEKDKLLDVLLNEGDG 296

  Fly   256 ---IRKCKTKEEIGKVDHGAKVYKVVLGEYNSL--------------------KETAP----KY- 292
               ....|.::..|.:|..|.|..|.:.|.:.|                    ||..|    || 
  Fly   297 LKPFESLKVEQGAGILDEIAAVPLVEVAEEDVLELRGHQMEKPPGPRKRGRPPKEKIPVVKRKYR 361

  Fly   293 SLSLPKKPQLRVSPEEKN--RRRRERIQAKPL------------NYVCDKCGHTFRQRSQLQMHL 343
            ..:.|:.|    ||::.:  .:|..:|..|.|            ::.|..|...:..|...:.| 
  Fly   362 KRNAPRSP----SPDDSSGTPKRVAKISKKELKERLKMINKMEKSWKCPHCVKIYHIRKPYEKH- 421

  Fly   344 LRHNRAKN---------------------FECPECPKKFYDLYTRNI------------------ 369
            ||.:...|                     |:||.| .|.|.:..|.:                  
  Fly   422 LRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPIC-SKIYLVEKRLVTHMKVHGEDGKLTFKCPC 485

  Fly   370 --------------HVRALHKGEHPFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEG 420
                          |.||.||  ....|..|::......|...|||:.|           ||:|.
  Fly   486 YCNLFFATKEQATEHARAQHK--ELLYCEKCDKYMTGHDSLKNHERNFH-----------SKKEP 537

  Fly   421 SSRH---YCTQCTKSYTSKKGLVLHMNFHNGSRP-FQCKICQMKFADPSAMKRHQALHD-KFPIR 480
            .|:.   .|.:|.|.:|.:..|..|:....|..| :.|.:|....:....:|.|..||. ..|.:
  Fly   538 RSQQRNLICDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLSTAGILKTHMLLHKADTPYQ 602

  Fly   481 CDICLKGFLLRSQLTKH-QDVHTGMHPHRCEICDVHYRHRYNLNKH 525
            ||.|.|.|.:::|...| :..||...|::|.:|...|.:|.:|..|
  Fly   603 CDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPYRESLLTH 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_650657.2 zf-AD 86..160 CDD:214871 19/79 (24%)
SUF4-like 320..>376 CDD:411020 19/120 (16%)
C2H2 Zn finger 323..351 CDD:411020 6/27 (22%)
C2H2 Zn finger 326..346 CDD:275368 5/19 (26%)
C2H2 Zn finger 354..375 CDD:411020 9/52 (17%)
C2H2 Zn finger 354..375 CDD:275368 9/52 (17%)
C2H2 Zn finger 383..401 CDD:275368 4/17 (24%)
C2H2 Zn finger 426..446 CDD:275368 6/19 (32%)
C2H2 Zn finger 454..474 CDD:275368 4/19 (21%)
C2H2 Zn finger 481..501 CDD:275368 7/20 (35%)
C2H2 Zn finger 509..528 CDD:275368 6/17 (35%)
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368 8/31 (26%)
C2H2 Zn finger 98..117 CDD:275368 4/20 (20%)
C2H2 Zn finger 134..152 CDD:275368 1/17 (6%)
C2H2 Zn finger 511..532 CDD:275370 6/20 (30%)
COG5048 <523..>672 CDD:227381 40/137 (29%)
C2H2 Zn finger 546..566 CDD:275368 6/19 (32%)
C2H2 Zn finger 575..595 CDD:275368 4/19 (21%)
C2H2 Zn finger 603..624 CDD:275368 7/20 (35%)
C2H2 Zn finger 632..652 CDD:275368 6/17 (35%)
C2H2 Zn finger 660..680 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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