DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and CG12219

DIOPT Version :10

Sequence 1:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_572312.1 Gene:CG12219 / 31572 FlyBaseID:FBgn0043796 Length:562 Species:Drosophila melanogaster


Alignment Length:592 Identity:100/592 - (16%)
Similarity:165/592 - (27%) Gaps:263/592 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 LEDFSSELLPDSEGVL------DEDDFPLDAEPTQF-----------SLSED------------- 230
            |::.|:.||.|..|..      ||||.  .|.|..:           .||.|             
  Fly    10 LDEQSAVLLFDGAGGASAPAPDDEDDG--KAMPESYLVQLISIHLYLCLSRDDAISTCICTECCS 72

  Fly   231 ELDLDRDTEKDFALEQNKSCNEIISIRKCKTKEEIGKVDHGAKVYKVVLGEYNSLKETAPKYSLS 295
            :|:...:..|...|:|...|::.::| .|    ::...:.|::.                    .
  Fly    73 QLESFHNFWKLVELKQTTLCSQFLAI-DC----DVNWSEDGSET--------------------Q 112

  Fly   296 LPKKPQLRVSPEEKNRRRRERIQAKPLNYVCDKCGHTFRQRSQLQMHLLRHNRAKNFECPECPKK 360
            |..:|||.:.|.|:.:........|   :.|..|..:|:.|..|:.|:..|...:...||.|...
  Fly   113 LDAQPQLLLEPAEEPKVVTPTTANK---FPCMFCEKSFKMRRYLEEHIATHTGDRPIACPYCEMA 174

  Fly   361 F---YDLYTRNIHVRALHKGE----------------H------------PFPC----------- 383
            |   .::||   ||::.|..:                |            |.|.           
  Fly   175 FRCRSNMYT---HVKSKHTTQWLKAREERDAAKSNQNHTTPEETAPAVLVPVPAPAPALASAPAS 236

  Fly   384 -----NHCNESFA---------------------------------------------------- 391
                 |..|.:..                                                    
  Fly   237 SASPGNTVNPAATATPASSATPTTNLAAAPLPSPPTVQQLPLSVIKSQPSEAMNLTITKTPPSGS 301

  Fly   392 ----NASSR---HRHERDVHGAGNRI------RTRVKSKE------------------------- 418
                |.|||   |..::..|..|:.:      :.|:|..|                         
  Fly   302 RGSRNRSSRRKTHSPKKVQHTEGSDVSDEDSPQKRLKENELILANYNAVAAAVVAAASLTGNPPG 366

  Fly   419 --EGSSRHYC----------------------------TQCTKSYTSKKGLVLHMNFHN------ 447
              :...:..|                            :..|.:.|:..|.::...:.|      
  Fly   367 QPDSLQQRLCASLLQQQHQEQLFAVMSATAAAAAAVGTSSATTTTTTTTGTMMAHPYGNHPPSET 431

  Fly   448 ---GSRPFQCKICQMKFADPSAM----------KRHQALHDKFPIRCDICLKGFLLRSQLTKHQD 499
               .:.|.|..|    .|.|.::          :.|:.| .|....||:|.|.|.::..|.:|..
  Fly   432 DKRPAAPLQAVI----HAAPVSIICPNCGELPGQNHRCL-SKPKYACDVCGKSFKMKRYLEEHFA 491

  Fly   500 VHTGMHPHRCEICDVHYRHRYNLNKHKNTDLHRDNMQKAIKEEVNGLQQAFK-DIDKEMDFESQT 563
            .|||:..|.|..|...:|.:.|:..|..      ...||..|.....:.|.| .:.::|  :...
  Fly   492 THTGVKLHTCAFCPTEFRSKSNMYHHTK------RKHKAEWERSRATRSAAKAGVQEQM--QHTN 548

  Fly   564 PMQPNAQ 570
            |.|..||
  Fly   549 PSQAQAQ 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_650657.2 zf-AD 86..160 CDD:214871
SUF4-like 320..>376 CDD:411020 16/58 (28%)
C2H2 Zn finger 323..351 CDD:411020 7/27 (26%)
C2H2 Zn finger 326..346 CDD:275368 6/19 (32%)
C2H2 Zn finger 354..375 CDD:411020 8/23 (35%)
C2H2 Zn finger 354..375 CDD:275368 8/23 (35%)
C2H2 Zn finger 383..401 CDD:275368 7/92 (8%)
C2H2 Zn finger 426..446 CDD:275368 4/47 (9%)
C2H2 Zn finger 454..474 CDD:275368 4/29 (14%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
C2H2 Zn finger 509..528 CDD:275368 5/18 (28%)
CG12219NP_572312.1 zf-AD 2..91 CDD:214871 19/82 (23%)
PHA00733 <117..189 CDD:177301 21/77 (27%)
C2H2 Zn finger 140..160 CDD:275368 6/19 (32%)
zf-H2C2_2 152..177 CDD:463886 7/24 (29%)
C2H2 Zn finger 168..186 CDD:275368 7/20 (35%)
C2H2 Zn finger 473..493 CDD:275370 7/19 (37%)
C2H2 Zn finger 501..522 CDD:275370 5/26 (19%)
Blue background indicates that the domain is not in the aligned region.

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