DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and klu-1

DIOPT Version :9

Sequence 1:NP_001303488.1 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_493611.2 Gene:klu-1 / 173366 WormBaseID:WBGene00013970 Length:543 Species:Caenorhabditis elegans


Alignment Length:327 Identity:65/327 - (19%)
Similarity:100/327 - (30%) Gaps:130/327 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 YNSLKETAPKYSLSLPKKPQLRVSPEEKN----RRRRERIQAKPLNYVCDKCGHTFRQRSQLQMH 342
            ||.|...:.:...::.....|:|.|..|:    ..|.:..:||.:.|.|..||..|....:|..|
 Worm   286 YNLLTARSAEDCSTISTPGPLKVFPRSKDDMTFAPRDDSSRAKQMQYPCTLCGQAFAVHDRLAKH 350

  Fly   343 LLRHNRAKNFECPECPKKFYDLYTRNIHVRALHKGEHPFPCNHCNESFANASSRHRHERDVHGAG 407
            :                                                  :||||.        
 Worm   351 I--------------------------------------------------ASRHRQ-------- 357

  Fly   408 NRIRTRVKSKEEGSSRHYCTQCTKSYTSKKGLVLHMNFHNGSRPFQCKICQMKFADPSAMKRHQA 472
                 |..:.::.|..|.|..|:||::....|..||..|.|::|:.|..|...|:          
 Worm   358 -----RSCTLDDASKVHKCNMCSKSFSRSDMLTRHMRLHTGAKPYSCPTCNQVFS---------- 407

  Fly   473 LHDKFPIRCDICLKGFLLRSQLTKHQDVHTGMHPHRCEICDVHYRHRYNLNKHKNTDLHRDN--- 534
                   |.|          .|:.|...|||..|:.|.:|:.....|..:::|..|....|:   
 Worm   408 -------RSD----------HLSTHLRTHTGEKPYACPMCNYSASRRDMISRHMRTHSLTDDSSI 455

  Fly   535 ----MQKAIK-----------------EEVNGLQQAFKDI---------DKEMDFES---QTPMQ 566
                .|.:|:                 |..:||..|||.|         .....|:|   .||..
 Worm   456 STPISQLSIRSATTSPLPPKIGSTATVEIGSGLLSAFKPILSASSSNLLSVSSPFQSLSLSTPPS 520

  Fly   567 PN 568
            |:
 Worm   521 PS 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_001303488.1 zf-AD 86..160 CDD:214871
COG5048 <323..528 CDD:227381 39/204 (19%)
zf-C2H2 324..346 CDD:278523 7/21 (33%)
C2H2 Zn finger 326..346 CDD:275368 6/19 (32%)
C2H2 Zn finger 354..375 CDD:275368 0/20 (0%)
C2H2 Zn finger 383..401 CDD:275368 4/17 (24%)
C2H2 Zn finger 426..446 CDD:275368 7/19 (37%)
C2H2 Zn finger 454..474 CDD:275368 3/19 (16%)
C2H2 Zn finger 481..501 CDD:275368 3/19 (16%)
C2H2 Zn finger 509..528 CDD:275368 4/18 (22%)
klu-1NP_493611.2 C2H2 Zn finger 334..354 CDD:275368 6/69 (9%)
zf-C2H2 369..391 CDD:278523 8/21 (38%)
C2H2 Zn finger 371..391 CDD:275368 7/19 (37%)
zf-H2C2_2 383..408 CDD:290200 9/41 (22%)
COG5048 395..>448 CDD:227381 17/79 (22%)
C2H2 Zn finger 399..419 CDD:275368 7/46 (15%)
zf-H2C2_2 411..436 CDD:290200 8/24 (33%)
C2H2 Zn finger 427..447 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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