DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17803 and znf1008

DIOPT Version :10

Sequence 1:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_005171144.1 Gene:znf1008 / 101886637 ZFINID:ZDB-GENE-131121-84 Length:390 Species:Danio rerio


Alignment Length:292 Identity:83/292 - (28%)
Similarity:118/292 - (40%) Gaps:64/292 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 DRDTEKDFALEQNKSCNEIISIRKCKTKEEIGKVDHGAKVYKVVLGEYNSLKETAPKYSLSLPKK 299
            |.|||.  ..||.|..:|.::..|..|.||                :.:|..||||      ||.
Zfish    12 DEDTEG--LAEQMKVEDEEVNEEKSSTSEE----------------KSSSGSETAP------PKG 52

  Fly   300 PQLRVSPEEKNRRRRERIQAKPLNYVCDKCGHTFRQRSQLQMHLLRHNRAKNFECPECPKKFYDL 364
                                   ::.|.:||.:|.::..|::|::.|...:.:.||:|.|.|...
Zfish    53 -----------------------SFSCPQCGKSFTRKGHLEVHMVIHTGERPYTCPQCAKSFTCK 94

  Fly   365 YTRNIHVRALHKGEHPFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEGSSRHYCTQC 429
            .:...|.| :|.||.||.|..|.:||.|:....||.| :| .|.|..|             |.||
Zfish    95 GSLKDHFR-IHTGERPFTCPQCEKSFTNSGGLKRHLR-IH-TGERPFT-------------CRQC 143

  Fly   430 TKSYTSKKGLVLHMNFHNGSRPFQCKICQMKFADPSAMKRHQALHD-KFPIRCDICLKGFLLRSQ 493
            .||:.|...|..||..|:..||:.|..|...:.....::.|...|. :.|..|.:|.|.|..:|.
Zfish   144 AKSFPSSGELKRHMRIHSRDRPYTCPQCGKSYKQKEVLREHTKTHSGEKPFTCTLCGKSFTQQST 208

  Fly   494 LTKHQDVHTGMHPHRCEICDVHYRHRYNLNKH 525
            |..|..||:|...|:|..|...:....||..|
Zfish   209 LKVHMKVHSGEKLHQCPECGRRFAEACNLKTH 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17803NP_650657.2 zf-AD 86..160 CDD:214871
SUF4-like 320..>376 CDD:411020 14/55 (25%)
C2H2 Zn finger 323..351 CDD:411020 7/27 (26%)
C2H2 Zn finger 326..346 CDD:275368 6/19 (32%)
C2H2 Zn finger 354..375 CDD:411020 7/20 (35%)
C2H2 Zn finger 354..375 CDD:275368 7/20 (35%)
C2H2 Zn finger 383..401 CDD:275368 7/17 (41%)
C2H2 Zn finger 426..446 CDD:275368 9/19 (47%)
C2H2 Zn finger 454..474 CDD:275368 3/19 (16%)
C2H2 Zn finger 481..501 CDD:275368 7/19 (37%)
C2H2 Zn finger 509..528 CDD:275368 5/17 (29%)
znf1008XP_005171144.1 C2H2 Zn finger 56..76 CDD:275368 6/19 (32%)
COG5048 80..>383 CDD:227381 57/177 (32%)
C2H2 Zn finger 84..104 CDD:275368 7/20 (35%)
C2H2 Zn finger 112..132 CDD:275368 8/20 (40%)
C2H2 Zn finger 140..160 CDD:275368 9/19 (47%)
C2H2 Zn finger 168..188 CDD:275368 3/19 (16%)
C2H2 Zn finger 196..216 CDD:275368 7/19 (37%)
C2H2 Zn finger 224..244 CDD:275368 5/17 (29%)
C2H2 Zn finger 252..272 CDD:275368
C2H2 Zn finger 280..300 CDD:275368
C2H2 Zn finger 308..328 CDD:275368
C2H2 Zn finger 336..356 CDD:275368
C2H2 Zn finger 364..382 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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