DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43102 and arhgef10lb

DIOPT Version :10

Sequence 1:NP_001247156.1 Gene:CG43102 / 42137 FlyBaseID:FBgn0262562 Length:2519 Species:Drosophila melanogaster
Sequence 2:XP_021329341.1 Gene:arhgef10lb / 567649 ZFINID:ZDB-GENE-090313-222 Length:1369 Species:Danio rerio


Alignment Length:1604 Identity:327/1604 - (20%)
Similarity:566/1604 - (35%) Gaps:503/1604 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1158 LANVDLRSSLEAIATP-----------------------RHST----------DERQRRHLDKST 1189
            :..|.:|.||:.:.:|                       ||.:          :|.:....|:.|
Zfish    23 METVCMRQSLKFLGSPKIHLAGSKRFSYFCWSEGVEDNKRHESMVTGVTQKPQEEEEEDEDDEET 87

  Fly  1190 KRKGMYIDNADWQAPTEAPQRG---LALDIS-VANLNAIKPES---------PEAN--TP-GASQ 1238
            ..|..:.|:.|.:...|..:.|   :..::| .:::||:..:|         |..|  || |..:
Zfish    88 GEKFEFDDSEDEKNAVEDKESGTPHVEAELSGSSDVNALYCQSMKHVMHSNQPAVNGGTPAGVEE 152

  Fly  1239 MYI-------------SSPQ-SSYSF-----ELNTPELEKG--------SPSWGSG------GLV 1270
            ..:             .||. ||.|.     |..||.|::.        |..|.|.      .|.
Zfish   153 QNMPTHPHTHPDMVARQSPDGSSVSIEPRAAEEQTPILKRNIIYEAPVHSREWFSVVSELTLRLH 217

  Fly  1271 RDKAQLLSNFSCHSSEEK-------------DDASCRSLSYLRTDSTSDNECDRAIRERERERIT 1322
            :.||...||......:||             ||..|.::       |..:..|..|.| |.:|..
Zfish   218 KGKAVPESNGDSPPEQEKVNSTAPVRSEVVYDDVPCENI-------TPPDVVDDVIYE-EVQRSG 274

  Fly  1323 SSPTPSSGDYDYKRFSKRPLRGPYGQMLEAEMKKPNRMHFEEILEELRETDSLHLRGSAPGVAAG 1387
            .|....:| :....|..      |.:..:.|.|:|.|......:..|::.               
Zfish   275 ESGLIDNG-WGSSEFES------YDEQSDNETKQPTRNKISPDVRRLKQR--------------- 317

  Fly  1388 GTVGPSRNLPQYSNSMRVRKTSTFLPVPSHARAASTPSQLEHASKGISAATAQISVSAKNLSQAE 1452
             .|...|.|     :||:              .|....||:   :.......|:..:|:|.::..
Zfish   318 -CVQTRREL-----AMRL--------------GARDVGQLK---QNYDIKVQQLMKAARNGTKDG 359

  Fly  1453 LDDQVHHMKRAASEAPAPKSNHSKRSQSMSTERPSQHHHHHGHGHGHSHGHHHAGKRSLDAGSGD 1517
            |:.....|.|..|..       ||:..:..||.                          |.|..|
Zfish   360 LEKTKIAMMRKVSFL-------SKKECTDDTED--------------------------DTGYLD 391

  Fly  1518 KAAKNAPLAGGTSGSGSGGGGKAGLKPTPALLAELLKGSSENMISEQRKKTIADTRTYVVQEIYR 1582
            .....                   ||..|..|:.:.:|.|...:          .|.:::..|.:
Zfish   392 VTVSE-------------------LKHPPPQLSPMPEGLSSQQV----------VRRHILGSIIQ 427

  Fly  1583 NEQSYVESLQTVVVKYLKVLKAPEHAGMIDTRTVDEIFFMVPDILEIHEKFLSDLKSRLDDWDVQ 1647
            :|:||::||:.::::|.|.|...| ..::..:.:..||:.:.:||:.|..|...|.||:.:||..
Zfish   428 SERSYLDSLKRILLEYKKPLMEAE-PRILSLKKIQPIFYRLKEILQCHSMFQIALASRVAEWDNT 491

  Fly  1648 QKVGDAFMDTFSKLEVLEVYTSFVNNCNRAKNAIRSMKHQRPSFSKFLETTAREHKGKLTLDNLL 1712
            :|:||.|:.:|||..||:||:.:|||...|...|:.....:|:|.:||:........::||..|:
Zfish   492 EKIGDLFVASFSKSMVLDVYSDYVNNFTNAMALIKKACMSKPAFLEFLKKKQATSIDRITLYGLM 556

  Fly  1713 IKPVQKFPNYELLFQRLIKHTDHDHPDTKHLQDVLKLVHDILVHINCKEREIMENGQREATLREL 1777
            :||:|:||.:.||.|.::|:|...|.|...||..|..:..:...:| :::.:.|.      |.|:
Zfish   557 VKPIQRFPQFILLLQDMLKNTSVGHQDRLPLQLALTELETLAEKLN-EQKRLAEQ------LAEI 614

  Fly  1778 EGVIEGITD------LIAPERQFLLFD-LVSMPSGQGAR----KDRGFFLFNDLLVLTSIKKRSG 1831
            :.:...|:|      |.:.::|.:|.: |:....|:..:    |:|..||.||:|:..:|..:. 
Zfish   615 QQLARSISDRSLSKQLNSDQKQLILSETLIETVYGEKGQVLKSKERKVFLLNDMLICANINVKG- 678

  Fly  1832 TIRKPN-SSICP-GTVATTLDTNKYKFLTKISLDCLEIVK------SKDENI------------- 1875
               .|: ||:.| |.        ||.......|..:::|:      .:.|:|             
Zfish   679 ---PPDISSLVPIGP--------KYAVKWTAPLPQVQVVEVGQETPQRKESILQQSSNRRLSSSN 732

  Fly  1876 ---------KRIVSEIETLAEDCNKLQQITDITVTIKYPHQYLEDVI-RELHREVQRQLSERQTN 1930
                     .|:..|::.|..|...::::|.:..|::..:|.|...: ::....:||.:..::..
Zfish   733 PQGKLFLGPPRLYQELQELQHDLTVVEEVTLLVGTLQGSYQNLNTTVGQDWCMALQRLIRIKEDE 797

  Fly  1931 DTQLNMLELTVSSPNGNQK------LAVVFSKTE--KRTQWEESFNEAKQKLAATLERHPIPEFL 1987
            ....|...|.:..|....|      ..||||...  .:..|....:.||                
Zfish   798 IQCANKCRLRLMVPGKPDKSGRPVSFTVVFSTPSPISKISWVNRLHLAK---------------- 846

  Fly  1988 TSIPIRKTRAGLQFTCAAATLSDNRDVWVCNSDGYVGQVCIMSLHPEPNVTSCNGVCNARILCVA 2052
              |.:|:               :|...|||..|              ...|.....|.   |...
Zfish   847 --IALRE---------------ENLPGWVCVED--------------DEKTKPPFWCP---LLAC 877

  Fly  2053 SVPAYSSAASSRNSSSEQPAGSGGQEEKDKRHTPQSYTQQLRDYRKSISP---SFQSASASATAT 2114
            .||.:                           ||:  .|.|:......:|   :....||::|:.
Zfish   878 RVPVF---------------------------TPK--VQDLKLQAALYNPVHCALLGFSAASTSL 913

  Fly  2115 PEKKKLTPTPTPVAGGEPADAATTGGSDTQLELNLSSSDDETEAAAASLNVAGSTGSTL--VERV 2177
            |:....               ..:.|.|:..::.:.|.:..|..:..|.    |.||.:  :|.:
Zfish   914 PQGYLW---------------VASRGDDSHGQVEIFSLNRPTPRSVKSF----SLGSQVLCLEYI 959

  Fly  2178 PSPAPSYHGHQDSNPEEGESNQS--------TMWIGTEDGCIHVYNSTDNIRIKKNRIKIEHHSA 2234
            ..|         |..||.|:..|        |:.:|..||.|.||.|.|................
Zfish   960 TEP---------STEEEQETQASEVPSKIGNTICVGLLDGNIMVYGSVDTAAQCLLTFCNPERCH 1015

  Fly  2235 VYSILYLDNRVFVSLANGDICVYLR-DGATSWNTCSSHCLSIGTVTSPVNKLLNVNGRLWCSIQG 2298
            |..:.:|.|.:|..|:||.:.||.| .|...|:..|...:.||  .:|:.|||.::..:|.|...
Zfish  1016 VLCLKHLGNFLFAGLSNGKVAVYNRKSGEGLWDPDSCRHVVIG--YAPILKLLRIDQCVWASCAN 1078

  Fly  2299 IIKVLDVETLTVVNQIQISSDSK-PITNMTVSNNHVWISIQNSAHIKCFHSNTHQLVTEVNLAPA 2362
            .:.|::..:|. ....::..|.. .:|:|..:...||::....:.::.||:.|.:.:.|:|::..
Zfish  1079 QVSVIEGSSLR-TQSFEVHPDPMVSVTHMVRAGGGVWMAFSEGSSLRLFHTETLEHLQEINISTP 1142

  Fly  2363 VNKMLSNCDEIIRQHKAACLRVTSLLCCKDLIWIGTSAGVLLTIPAQGYEKGAINIVPTGIP--H 2425
            .....|      .|....|  |:|||.|:.|:|:||:.|:::|:|....| |...|...|:.  :
Zfish  1143 SAYFSS------AQKPNLC--VSSLLICQGLLWVGTAQGIIVTLPVPRLE-GIPKITGKGMTSLN 1198

  Fly  2426 GHTGHVRFLTFVET----------TGLEGAASGAGGGRDAGSSNSDE------YTKQGSIK---- 2470
            .|.|.|.||....:          :..:...|.:||.....:::|:|      .|.||..|    
Zfish  1199 AHNGPVEFLLATSSVLPQDFLKRDSATDNVDSNSGGDEKEATNSSEESLQQADATSQGEAKSKGV 1263

  Fly  2471 ----HSKSKS------------------------------------------------------- 2476
                |.:|.|                                                       
Zfish  1264 LLQYHLRSTSRLPGKVLTAQPEETPDSAQHTVEHSLEDGSIYELSDDPEVWVRGPGTTSKEAGRR 1328

  Fly  2477 -ETNNTLIISGGDGYEDFRNSGANSLSEIAGREDSTNHLLIWQI 2519
             :..:..:||||.|:....||..::       |.|.|.|::||:
Zfish  1329 EKVTSAAVISGGKGFRRLANSSHSA-------ESSENTLMVWQL 1365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43102NP_001247156.1 RhoGEF 1573..1758 CDD:238091 60/184 (33%)
WD40_2 <2201..>2462 CDD:465964 70/274 (26%)
arhgef10lbXP_021329341.1 RhoGEF 418..602 CDD:238091 60/184 (33%)
PH_19 626..773 CDD:465965 30/158 (19%)
WD40_2 881..1369 CDD:465964 115/561 (20%)
WD40 repeat 911..949 CDD:293791 7/56 (13%)
WD40 repeat 953..1009 CDD:293791 16/64 (25%)
WD40 repeat 1015..1047 CDD:293791 11/31 (35%)
WD40 repeat 1052..1094 CDD:293791 10/44 (23%)
WD40 repeat 1100..1138 CDD:293791 8/37 (22%)

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