DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TyrR and hrh3

DIOPT Version :10

Sequence 1:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_001020689.1 Gene:hrh3 / 561773 ZFINID:ZDB-GENE-040724-204 Length:473 Species:Danio rerio


Alignment Length:585 Identity:146/585 - (24%)
Similarity:231/585 - (39%) Gaps:153/585 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GLPENISIVYEDAGNGTGGGGVGGVGGGYPSGPNGTDAVALTEPGPTAPVTTFNYYNESAAAAEW 104
            |:|..:|:::: :||......         ||....:|.:|      |.:.||     ....|::
Zfish    13 GIPTAVSLMWK-SGNHQSSNW---------SGMERENATSL------ADLDTF-----ENRRAQY 56

  Fly   105 AHFYDLVLSWQGIILIAVFATFIV-VTVIGNTLVILAILTTRRLRTITNCFVMSLAVADLLVGIF 168
            ..|     |....|.:.|..|.:| .||:||.|||||.:..:.|||..|.|.::||:||.|||.|
Zfish    57 GQF-----SPSTSIFLTVLMTLLVFATVLGNALVILAFVVEKSLRTQGNFFFLNLAIADFLVGGF 116

  Fly   169 VMPPAVAVHLIGSWQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTRPLTYSRKRRSKRL 233
            .:|..:...|.|.|:||..||.:|:.:|.:|||||:.::..||.||:.:||:.::|..::...:.
Zfish   117 CIPVYIPYVLTGEWRLGRGLCKLWLVVDYMLCTASVFNIVLISFDRFQSVTKAVSYRCQKGITKD 181

  Fly   234 ALIMILIVWLLALAITCPPMLGWYE-------PGRRDLRECRYNQNEGYVIFSAMG-SFFIPMAV 290
            |::.:|.|||.|..:..|.::.|..       |......|..:|   .|.:.:|.. .||.|...
Zfish   182 AVLKMLCVWLAAFLLYGPAIISWEHITGGSVVPDGECYAEFYFN---WYFLMTASTVEFFTPFIS 243

  Fly   291 MIY----VYARISCVIASRHDNMTDISVHNKKFKRYTAADVENELSEQEQHSSVGQRQRQATSRT 351
            :.|    :|..|....|.|.:..|.:.:.:.|.|...|.||:                     |.
Zfish   244 VTYFNLSIYINIRNRCAMREEQPTYVRLRSFKMKPLGAGDVQ---------------------RV 287

  Fly   352 FSNQTIAKELQDMMLSDSDNCAAMGAGGAGGGGGGASSATGGTHCQSLLALPSGGVGGSMGCAKN 416
            |    ..:.:::..::|                               ||            :::
Zfish   288 F----FVRPVEESRVAD-------------------------------LA------------SRS 305

  Fly   417 GCYELTRPSSLKRASTASTTITTMTSGMGPGSSLLDAQWQSQPPGQTGQVQTHSL-SQPPRTHSF 480
            .|..|        ||||.  ::....|.|..|...|:.....||   .||:...| :...:.|..
Zfish   306 RCCRL--------ASTAK--VSAAEFGNGRQSKRRDSTLADLPP---LQVEERILAASEAQFHYV 357

  Fly   481 RHSHGERDRERLRSHHHHPHYHHQAGVTTTSTSGNTSANTNSKSLSNRITSLKKENKTTQTLSIV 545
            .||.|             ||.|....|.               ||:||. .|.::.|..::|:::
Zfish   358 DHSAG-------------PHRHRPDMVA---------------SLANRF-RLSRDKKVAKSLAVI 393

  Fly   546 VGGFIACWLPFFINYLITPFLAEHQASQMLAKALTWLGWFNSAINPFIYAFYSVDFRAAFWRLTC 610
            |..|..||.|:.:..:|............|.:...||.|.||:|||.:|......|:.||.:|.|
Zfish   394 VCVFGLCWAPYTLLMIIRAACHGQCVQHYLYEISFWLLWINSSINPILYPLCHSSFKRAFSKLLC 458

  Fly   611  610
            Zfish   459  458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 67/198 (34%)
TM helix 1 118..144 CDD:320189 13/26 (50%)
TM helix 2 151..177 CDD:320189 11/25 (44%)
TM helix 3 189..219 CDD:320189 12/29 (41%)
TM helix 4 232..255 CDD:320189 7/22 (32%)
TM helix 5 272..297 CDD:320189 7/29 (24%)
7tm_GPCRs <533..605 CDD:475119 19/71 (27%)
TM helix 6 539..561 CDD:320189 6/21 (29%)
TM helix 7 573..598 CDD:320189 10/24 (42%)
hrh3NP_001020689.1 7tmA_Histamine_H3R 65..453 CDD:320423 127/500 (25%)
TM helix 1 66..92 CDD:320423 12/25 (48%)
TM helix 2 99..126 CDD:320423 11/26 (42%)
TM helix 3 137..167 CDD:320423 12/29 (41%)
TM helix 4 182..200 CDD:320423 6/17 (35%)
TM helix 5 225..255 CDD:320423 8/32 (25%)
TM helix 6 381..411 CDD:320423 7/29 (24%)
TM helix 7 421..446 CDD:320423 10/24 (42%)

Return to query results.
Submit another query.