DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrR and si:dkey-247m21.3

DIOPT Version :9

Sequence 1:NP_001287381.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:XP_017208337.2 Gene:si:dkey-247m21.3 / 559089 ZFINID:ZDB-GENE-091204-249 Length:390 Species:Danio rerio


Alignment Length:535 Identity:128/535 - (23%)
Similarity:188/535 - (35%) Gaps:222/535 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 IILIAVFATFIVVTVIGNTLVILAILTTRRLR-TITNCFVMSLAVADLLVGIFVMPPAVAVHLIG 180
            |.|..|..|.|::|.:||.||::|:...|:|| ..||.|::|||.|||||.:.|||.|......|
Zfish    23 ITLSIVLVTIIIMTALGNLLVMVALCKDRQLRKKKTNFFIVSLAFADLLVALVVMPLAAIELTTG 87

  Fly   181 SWQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAV-TRPLTYSRKRRSKRLALIMILIVWLL 244
            .|..|...|.:..||||||.|||||.||.|::|||.|: .:||.|:.|....|::| |::..|::
Zfish    88 KWNYGETFCLVRTSLDVLLTTASILHLCCIALDRYYAICCQPLVYNNKMTPVRVSL-MLVGCWVI 151

  Fly   245 ALAIT-CPPMLGWYEPG------RRDLRE-----CRYNQNEGYVIFSAMGSFFIPMAVMIYVYAR 297
            ...|: .|.|..|...|      :|.|..     |.:..|:.|.:..:..:|::|:.:|:..|.|
Zfish   152 PFFISFLPIMQSWNTIGIESFIEQRKLNSSRNSTCVFMVNQPYALVCSAVAFYVPLVLMVLAYQR 216

  Fly   298 ISCVIASRHDNMTDISVHNKKFKRYTAADVENELSEQEQHSSVGQRQRQATSRTFSNQTIAKELQ 362
            |                       |..|                                     
Zfish   217 I-----------------------YVTA------------------------------------- 221

  Fly   363 DMMLSDSDNCAAMGAGGAGGGGGGASSATGGTHCQSLLALPSGGVGGSMGCAKNGCYELTRPSSL 427
                                                            ||.|:       |..||
Zfish   222 ------------------------------------------------MGHAR-------RIGSL 231

  Fly   428 KRASTASTTITTMTSGMGPGSSLLDAQWQSQPPGQTGQVQTHSLSQPPRTHSFRHSHGERDRERL 492
                                                                             
Zfish   232 ----------------------------------------------------------------- 231

  Fly   493 RSHHHHPHYHHQAGVTTTSTSGNTSANTNSKSLSNRITSLKKENKTTQTLSIVVGGFIACWLPFF 557
                      |:||...|||..|...:.:|:        :|.|.|..:||::::|.|..||.|||
Zfish   232 ----------HRAGSAPTSTYPNNDQHGSSR--------IKNETKAAKTLAVIMGCFCLCWAPFF 278

  Fly   558 INYLITPFLAEHQASQMLAKALTWLGWFNSAINPFIYAFYSVDFRAAFWRLTC---KRF-----F 614
            :..::.||: .:.....:..|..|||:.||.:|||:|||.:..||.||..:.|   :|:     |
Zfish   279 VTNVVDPFI-NYSVPWQMWTAWLWLGYINSGLNPFLYAFLNRAFRRAFLMILCCGDERYARQGGF 342

  Fly   615 SAGQKPQFPTNTMSI 629
            |..::.....|..||
Zfish   343 SPSRQCSESVNGTSI 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_001287381.1 7tm_4 127..>249 CDD:304433 55/123 (45%)
7tm_1 133..>298 CDD:278431 67/178 (38%)
si:dkey-247m21.3XP_017208337.2 7tmA_5-HT4 23..325 CDD:320184 119/501 (24%)
TM helix 1 24..50 CDD:320184 10/25 (40%)
TM helix 2 58..84 CDD:320184 15/25 (60%)
TM helix 3 96..126 CDD:320184 19/29 (66%)
TM helix 4 139..162 CDD:320184 6/23 (26%)
TM helix 5 191..220 CDD:320184 9/51 (18%)
TM helix 6 254..284 CDD:320184 12/29 (41%)
TM helix 7 293..318 CDD:320184 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.870

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