DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrR and 5-HT2B

DIOPT Version :9

Sequence 1:NP_001287381.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster


Alignment Length:894 Identity:186/894 - (20%)
Similarity:276/894 - (30%) Gaps:390/894 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 YNESAAAAEWAHFYDLVLS----WQGIILIAVFATFIVVTVIGNTLVILAILTTRRLRTITNCFV 155
            :|.:..|...|.|.|:...    |..:.|:.|..     |..||.||.|||...|||:.:||.|:
  Fly    53 WNATGNATISATFEDVPFDANNYWALLALVLVLG-----TAAGNILVCLAIAWERRLQNVTNYFL 112

  Fly   156 MSLAVADLLVGIFVMPPAVAVHLIGSWQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTR 220
            ||||:.||:|.:.|||..:...:.|.:.||...|..||.||||.|||||:.||.|||||||::..
  Fly   113 MSLAITDLMVAVLVMPLGILTLVKGYFPLGSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRY 177

  Fly   221 PLTYSRKRRSKRLALIMILIVWLLALAITCPPMLGWYEPGRRDLRECRYNQNEGYV--------- 276
            |:.:.|.:..:|:.| .|:.||||::|::.|..|             .|::|...|         
  Fly   178 PMRFGRNKTRRRVTL-KIVFVWLLSIAMSLPLSL-------------MYSKNHASVLVNGTCQIP 228

  Fly   277 --IFSAMGS---FFIPMAVMIYVYARISCVIASRHDNM--------------------------- 309
              ::..:||   |:||:.||:..|.....::|.:..|:                           
  Fly   229 DPVYKLVGSIVCFYIPLGVMLLTYCLTVRLLARQRQNLGGGQQTAAATPGWASGWLGQAPALERR 293

  Fly   310 ---------------------------TDIS------------------------VH-------- 315
                                       ||:|                        :|        
  Fly   294 CTWRRLLKPGPGNASSVLHAHSANSTDTDLSTLDNHELWLPDSSIKEPTPTTMTALHQFGAEMLK 358

  Fly   316 ------------------NKKF--------------KRYTAADVENELSEQEQHSSVGQRQRQAT 348
                              ..:|              :||.|...::.....:||.: |...:||:
  Fly   359 LSRGLESVASSSTTGSPTKSEFSLSNHLQLQYPSSPQRYAATHQQSHHHNHQQHPA-GVYHQQAS 422

  Fly   349 SR--------TFSNQTIAKELQDMMLSDSDNCAAMGAGGAGGGG---------------GGASSA 390
            .:        ..|..|:..|.:    |..::.|:...||....|               ..||||
  Fly   423 PKGRHGTTVLGLSTTTLGIERE----STRNSLASSRMGGEQSDGTLSQLSQRLRAYKKRRRASSA 483

  Fly   391 ----------------------------------------------------------------- 390
                                                                             
  Fly   484 VPGREKRAGHEDADEDVETPTSTLRRHKRHNSLPKNALYPRHTTVQESLDDDDDEEEESAQQKDQ 548

  Fly   391 ------------------------TGGTHCQSLLALPS------GGVGGSMGCAKNGCYELTRPS 425
                                    .|..|....|.|||      .|......|.|:.  |:...|
  Fly   549 QTKSKICHSDTELDPPQKAKQCHIAGQNHQSDYLQLPSVCTCPYFGDRPLQNCVKSA--EVKIIS 611

  Fly   426 SLKRASTASTTITTMTSGM-----------------------GP--------------------G 447
            |..|.:|.:|.:::..|.|                       ||                    |
  Fly   612 SAFRVTTTTTAVSSSPSEMELLMCSSGNKKSLTSSVSAGITGGPAGAAPATVGSTLSPHSAHNQG 676

  Fly   448 SSLL---DAQWQSQPPG------------------------------QTGQVQTHSLSQPPRTHS 479
            |||.   |.......||                              ..|.|:|..|..|.:|.:
  Fly   677 SSLTVQSDGSGYLAAPGTPCPGRRKLSISKTASVVTWDSSRHRRRGSSFGGVRTSLLLTPTKTAT 741

  Fly   480 FRHSHGERDRERLRSHHHHPHYH---HQAGVTTTSTSG----------------NTSANTNSKSL 525
            ..:|.....|......|.:.:|.   ...|.|.|:||.                |:|..:.:.|.
  Fly   742 TSNSSTPLRRSATLRSHQNMNYQGAGECGGKTRTTTSSPCMLQRQQTVRSHHSRNSSVISRNSSR 806

  Fly   526 SNRITSLKKENKTTQTLSIVVGGFIACWLPFFINYLITPFLA--EHQASQMLAKALTWLGWFNSA 588
            ..||  ::.|.|.|:.|.:|...|:..|.|||:..|:....|  |.:.|..:...:||||:.:|.
  Fly   807 HGRI--IRLEQKATKVLGVVFFTFVILWSPFFVLNLLPTVCAECEERISHWVFDVVTWLGYASSM 869

  Fly   589 INPFIYAFYSVDFRAAFWRLTCKRFFSAG-------QKPQFP----TNT 626
            :||..|..::..||.||.::...|:.|..       |.|..|    |||
  Fly   870 VNPIFYTIFNKVFRQAFKKVLLCRYSSTSAWRPSRXQTPVKPGKLKTNT 918

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_001287381.1 7tm_4 127..>249 CDD:304433 58/121 (48%)
7tm_1 133..>298 CDD:278431 70/178 (39%)
5-HT2BNP_001262373.1 7tm_1 90..>262 CDD:278431 71/185 (38%)
7tm_4 90..>238 CDD:304433 63/161 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460679
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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