DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrR and DopEcR

DIOPT Version :9

Sequence 1:NP_001287381.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_001014559.1 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster


Alignment Length:221 Identity:65/221 - (29%)
Similarity:103/221 - (46%) Gaps:25/221 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 ILIAVFATFIVVTVIGNTLVILAILTTRRLRTITNCFVMSLAVADLLVGIFVMPPAVAVHLIGSW 182
            :||::..   |..|:.|.|:|......:....:.|.:::|||:||||.|:.|:|.:|...|.|.|
  Fly    20 VLISILG---VAIVLSNLLIIATYANFKGPTEVINYYLLSLAIADLLCGLLVVPFSVYPALTGEW 81

  Fly   183 QLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTRPLTYSRKRRSKRLALIMILIVWLLALA 247
            ..|.::|.....|:|.|...|:.:...|||||||||.:||.|...:...|....|: ..|:.|..
  Fly    82 MYGDIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKTRCQCWMV-FTWISAAL 145

  Fly   248 ITCPPMLGWYEPGRRDLRE-CRYNQNEGYVIFSAMGSFFIPMAVMIYVYARISCVIASRHDNMTD 311
            :.|||:||:..|...::.. |..:       :..|.::...:|:::...:.||.|     .|...
  Fly   146 LCCPPILGYSMPIENNMTHICMLD-------WGNMAAYSATLAILVLGPSLISIV-----HNYGY 198

  Fly   312 ISVHNKKF--------KRYTAADVEN 329
            |.|..:|.        |.|..|..||
  Fly   199 IFVMMRKIRSGEPIHDKEYATALAEN 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_001287381.1 7tm_4 127..>249 CDD:304433 42/121 (35%)
7tm_1 133..>298 CDD:278431 49/165 (30%)
DopEcRNP_001014559.1 7tm_classA_rhodopsin-like 18..289 CDD:410626 65/221 (29%)
TM helix 1 18..42 CDD:410626 7/24 (29%)
TM helix 2 51..73 CDD:410626 11/21 (52%)
TM helix 3 89..111 CDD:410626 5/21 (24%)
TM helix 4 134..150 CDD:410626 4/16 (25%)
TM helix 5 174..197 CDD:410626 5/27 (19%)
TM helix 6 230..252 CDD:410626
TM helix 7 264..289 CDD:410626
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460667
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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