DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrR and chrm2a

DIOPT Version :10

Sequence 1:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_840086.1 Gene:chrm2a / 352938 ZFINID:ZDB-GENE-030314-1 Length:495 Species:Danio rerio


Alignment Length:561 Identity:142/561 - (25%)
Similarity:239/561 - (42%) Gaps:140/561 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 NESAAAAEWAHFYDLVLSWQGIILIAVFATFIVVTVIGNTLVILAILTTRRLRTITNCFVMSLAV 160
            ||:...|:.:.:..:    :.:.::.|..:..:||||||.||:|:|...|.|:|:.|.|:.|||.
Zfish    15 NETMETADESPYKTV----EVVFIVLVAGSLSLVTVIGNILVMLSIKVNRSLQTVNNYFLFSLAC 75

  Fly   161 ADLLVGIFVMPPAVAVHLIGSWQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTRPLTYS 225
            |||::|:..|.......:||.|.||.|:||:|::||.::..||:::|..||.|||..||:||:|.
Zfish    76 ADLIIGLCSMNLYTVYIVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLSYP 140

  Fly   226 RKRRSKRLALIMILIVWLLALAITCPPMLGW-YEPGRRDL--REC--RYNQNEGYVIFSAMGSFF 285
            ..|.:| :|.:||...|:|:..:..|.:|.| :..|.|.:  :||  ::..|......:|:.:|:
Zfish   141 VNRTTK-MAGMMIAAAWVLSFILWAPAILFWQFIVGGRTVPEKECYIQFFSNAAVTFGTAIAAFY 204

  Fly   286 IPMAVMIYVYARISCVIASR--HDNM------TDISVHNKKFKRYTAADVENELSEQEQHSSVGQ 342
            :|:.:|:.:|.::|....||  .||.      .|::..|:..:........|.|:.:|    ..:
Zfish   205 LPVIIMMVLYWQVSRASKSRVKKDNRKPSGGNLDVASSNQIRENSANKPTNNNLTAEE----TDR 265

  Fly   343 RQRQATSRTFSNQTIAKELQDMMLSDSDNCAAMGAGGAGGGGGGASSATGGTHCQSLLALPSGGV 407
            .|.|.|..|. ||..|| ||:              |.|.....|.:...|..:|           
Zfish   266 GQTQLTDDTI-NQHDAK-LQN--------------GKAPSTASGEAEEAGQANC----------- 303

  Fly   408 GGSMGCAKNGCYELTRPSSLKRASTASTTITTMTSGMGPGSSLLDAQWQSQPPGQTGQVQTHSLS 472
                           .|:..|.:|..|      |||.|   ::.:.:.::.||.......:.:  
Zfish   304 ---------------IPAEEKESSNDS------TSGSG---AVTNQKEEAAPPSSAAANDSQT-- 342

  Fly   473 QPPRTHSFRHSHGERDRERLRSHHHHPHYHHQAG--------VTTTSTSGNTSANTNS------- 522
                  |.||                   ..:||        :.|.|..|:..|.:|:       
Zfish   343 ------STRH-------------------RAKAGGSKLTCIKIITKSPKGDCYAPSNATVEIVPA 382

  Fly   523 ----KSLSNRITSLKK------------ENKTTQTLSIVVGGFIACWLPFFINYLITPFLAEHQA 571
                ..::.:|..:.|            |.|.|:|:..::..|:|.|.|:.:..||..|     .
Zfish   383 VERQNHVARKIVKMTKQPPKKKKAPSSREKKVTRTIMAILVAFVATWTPYNVMVLINAF-----C 442

  Fly   572 SQMLAKAL----TWLGWFNSAINPFIYAFYSVDFRAAFWRL 608
            |..:...:    .||.:.||.|||..||..::.|:..|.:|
Zfish   443 SSCIPNTVWTIGYWLCYINSTINPACYALCNITFKKTFKQL 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 69/190 (36%)
TM helix 1 118..144 CDD:320189 11/25 (44%)
TM helix 2 151..177 CDD:320189 10/25 (40%)
TM helix 3 189..219 CDD:320189 13/29 (45%)
TM helix 4 232..255 CDD:320189 6/22 (27%)
TM helix 5 272..297 CDD:320189 6/24 (25%)
7tm_GPCRs <533..605 CDD:475119 23/87 (26%)
TM helix 6 539..561 CDD:320189 6/21 (29%)
TM helix 7 573..598 CDD:320189 9/28 (32%)
chrm2aNP_840086.1 TM helix 6 409..439 CDD:320424 9/29 (31%)
TM helix 7 448..473 CDD:320424 9/24 (38%)
7tmA_mAChR_M2 32..480 CDD:320424 137/535 (26%)
TM helix 1 33..59 CDD:320424 11/25 (44%)
TM helix 2 66..92 CDD:320424 10/25 (40%)
TM helix 3 104..134 CDD:320424 13/29 (45%)
TM helix 4 146..169 CDD:320424 7/23 (30%)
TM helix 5 191..220 CDD:320424 7/28 (25%)

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