DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TyrR and ser-3

DIOPT Version :10

Sequence 1:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_491954.1 Gene:ser-3 / 259744 WormBaseID:WBGene00004778 Length:610 Species:Caenorhabditis elegans


Alignment Length:605 Identity:160/605 - (26%)
Similarity:252/605 - (41%) Gaps:142/605 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LTEPGPTAPVTTFNYYNESAAAAEW------AHFYDLVLSWQGIILIAVFATFIVVTVIGNTLVI 138
            :||..|..     ::|       ||      |.|:.:      ..:|:|....:||.|:||.|||
 Worm    34 ITEESPNC-----SFY-------EWSRNPSHAQFFRI------FSIISVLTVLVVVVVLGNALVI 80

  Fly   139 LAILTTRRLRTITNCFVMSLAVADLLVGIFVMPPAVAVHLIGS-WQLGWVLCDIWISLDVLLCTA 202
            .|:|..||||:.|...::|||:||||||..::|.::|..::.. |..|...|.||::||:.:|||
 Worm    81 AAVLLRRRLRSATGLLILSLALADLLVGTVILPFSIANEVLDQYWIFGETWCTIWLTLDIWMCTA 145

  Fly   203 SILSLCAISVDRYLAVTRPLTYSRKRRSKRLALIMILIVWLLALAITCPPMLGWYEPGRRDLREC 267
            ||.:|.|||:|||:|:.:||.|. ...:|..|...:.|||:.:..| |.|........:.....|
 Worm   146 SIYNLVAISIDRYIAIIKPLNYP-MLVTKFRARCTVAIVWIGSFLI-CSPSFFLASSIKDKETPC 208

  Fly   268 R---YNQNEGYVIFSAMGSFFIPMAVMIYVYARISCVIASR------HDNMTDI-SVHNKKFKRY 322
            |   .|....||:|||..||:|||.::::||.||  .:|:|      :..|..: :..|||    
 Worm   209 RCTPANAGRVYVVFSASSSFYIPMIIVVFVYFRI--YVAARAATKSIYSGMMSVTAAANKK---- 267

  Fly   323 TAADVENELSEQEQHSSVGQRQRQATSRTFSNQTIAKELQDMMLSDSDNCAAMGAGGAGGGGGGA 387
                 :|..|....|..|..:......|.....::..::                         .
 Worm   268 -----QNPKSYLLNHPDVINKDSLPMLRVHRGSSVVAQI-------------------------T 302

  Fly   388 SSATGGTHCQSLLALPSGGVGGSMGCAKNGCYELTRPSSLKRASTASTTITTMTSGMGPGSSLLD 452
            .:....|..|:         |.|:....||..::| .::.|....|:.:..|:.:....|::   
 Worm   303 PNKPYNTCRQN---------GNSIDATANGTSQIT-AAATKARKFANDSAKTLVNRGAVGAT--- 354

  Fly   453 AQWQSQPPG----QTGQVQTHSLSQPPRTHSFR---HSHGERDRERL--RSHHHHPHYHHQAGVT 508
               |..|.|    :.|:....|:.....|:|:.   |..|..:...|  .|.......:.:....
 Worm   355 ---QQAPIGARFKRHGRDSESSVDSMNGTNSYSATPHKSGNEELGSLIENSRSSSTDSNEKTEQL 416

  Fly   509 TTSTSGNTSANTN---------------------SKSLSNRITSLKK-----------------E 535
            |..|..|.|.:.|                     ||||:::...|.:                 |
 Worm   417 TNQTDDNFSMSNNNNNGDEKEAFDESLLSESKKKSKSLASKFNHLMRRGQKKRTAGAYEKRLSLE 481

  Fly   536 NKTTQTLSIVVGGFIACWLPFFINYLITPFLAEHQASQMLAKALTWLGWFNSAINPFIYAFYSVD 600
            .|..:|::||.|.||.|||.|.:.|.:     |.:.:.::...:.|||:.|||:||.||..::.:
 Worm   482 IKAAKTVAIVTGCFIFCWLGFALVYGL-----EIKLNDVVWSIVFWLGYLNSALNPVIYTVFNRE 541

  Fly   601 FRAAFWR-LTCKRFFSAGQK 619
            ||..|.| |||.......||
 Worm   542 FRICFKRLLTCHHLNHPTQK 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 76/189 (40%)
TM helix 1 118..144 CDD:320189 12/25 (48%)
TM helix 2 151..177 CDD:320189 12/25 (48%)
TM helix 3 189..219 CDD:320189 18/29 (62%)
TM helix 4 232..255 CDD:320189 7/22 (32%)
TM helix 5 272..297 CDD:320189 12/24 (50%)
7tm_GPCRs <533..605 CDD:475119 26/88 (30%)
TM helix 6 539..561 CDD:320189 10/21 (48%)
TM helix 7 573..598 CDD:320189 10/24 (42%)
ser-3NP_491954.1 7tmA_Octopamine_R 80..>252 CDD:320191 69/175 (39%)
TM helix 2 93..119 CDD:320191 12/25 (48%)
TM helix 3 132..162 CDD:320191 18/29 (62%)
TM helix 4 174..197 CDD:320191 7/23 (30%)
TM helix 5 216..245 CDD:320191 14/30 (47%)
7tm_GPCRs <479..546 CDD:475119 26/71 (37%)
TM helix 6 485..507 CDD:410628 10/21 (48%)
TM helix 7 514..539 CDD:410628 10/24 (42%)

Return to query results.
Submit another query.