DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TyrR and Chrm3

DIOPT Version :10

Sequence 1:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_036659.2 Gene:Chrm3 / 24260 RGDID:2343 Length:589 Species:Rattus norvegicus


Alignment Length:652 Identity:167/652 - (25%)
Similarity:262/652 - (40%) Gaps:164/652 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SAIYPSLMYVAASSSSLRGLGLGSGVGVGGLPENISIVYEDAGNGTGGGGVGGVGGGYPSGPNGT 75
            |.::|::......|.|..||.||:...:|..  |||   ::.||             :.|....:
  Rat    10 SPLFPNISSSWVHSPSEAGLPLGTVTQLGSY--NIS---QETGN-------------FSSNDTSS 56

  Fly    76 DAVALTEPGPTAPVTTFNYYNESAAAAEWAHFYDLVLSWQGIILIAVFATFI-VVTVIGNTLVIL 139
            |.:.    |.|.                          || ::.||....|: :||:|||.|||:
  Rat    57 DPLG----GHTI--------------------------WQ-VVFIAFLTGFLALVTIIGNILVIV 90

  Fly   140 AILTTRRLRTITNCFVMSLAVADLLVGIFVMPPAVAVHLIGSWQLGWVLCDIWISLDVLLCTASI 204
            |....::|:|:.|.|::|||.|||::|:..|.......::..|.||.:.||:|:|:|.:...||:
  Rat    91 AFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASV 155

  Fly   205 LSLCAISVDRYLAVTRPLTYSRKRRSKRLALIMILIVWLLALAITCPPMLGW-YEPGRRDL--RE 266
            ::|..||.|||.::||||||..||.:|| |.:||.:.|:::..:..|.:|.| |..|:|.:  .|
  Rat   156 MNLLVISFDRYFSITRPLTYRAKRTTKR-AGVMIGLAWVISFVLWAPAILFWQYFVGKRTVPPGE 219

  Fly   267 CRYNQ--NEGYVIF-SAMGSFFIPMAVMIYVYARISCVIASRHDNMTDISVHNKKFKRYTAADVE 328
            | :.|  :|..:.| :|:.:|::|:.:|..:|.||......|...:..:....      |.|:.|
  Rat   220 C-FIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYKETEKRTKELAGLQASG------TEAEAE 277

  Fly   329 NEL----------SEQEQHSSVGQRQRQATSR------TFSNQTIAKEL-QDMMLSDS--DNCAA 374
            |.:          |.:.|...|.:..|:...|      |.|.:..|::: ||...|||  :|.||
  Rat   278 NFVHPTGSSRSCSSYELQQQGVKRSSRRKYGRCHFWFTTKSWKPSAEQMDQDHSSSDSWNNNDAA 342

  Fly   375 MGAGGAGGGGGGASSATGGTHCQSLLALPSGGVGGSMGCAKNGCYELTRPSSLKRASTASTTITT 439
            ...         .:||:....              .:|......|.:.    ||.          
  Rat   343 ASL---------ENSASSDEE--------------DIGSETRAIYSIV----LKL---------- 370

  Fly   440 MTSGMGPG-SSLLDAQWQSQPPGQTGQVQTHSLSQ---PPRTHSFRHSHGERDRERLRSHHHHPH 500
                  || ||:|::  ...|.....||....|..   ....|..:......|.:..:.......
  Rat   371 ------PGHSSILNS--TKLPSSDNLQVSNEDLGTVDVERNAHKLQAQKSMGDGDNCQKDFTKLP 427

  Fly   501 YHHQAGVTTTSTSG-NTSAN----------------------TNSKSLSNRITSLKKENKTTQTL 542
            ...::.|.|..||. |:||:                      |.|:....:..||.||.|..|||
  Rat   428 IQLESAVDTGKTSDTNSSADKTTATLPLSFKEATLAKRFALKTRSQITKRKRMSLIKEKKAAQTL 492

  Fly   543 SIVVGGFIACWLPFFINYLITPFLAEHQASQMLAKAL----TWLGWFNSAINPFIYAFYSVDFRA 603
            |.::..||..|.|:.|..|:..|     ....:.|..    .||.:.||.:||..||..:..||.
  Rat   493 SAILLAFIITWTPYNIMVLVNTF-----CDSCIPKTYWNLGYWLCYINSTVNPVCYALCNKTFRT 552

  Fly   604 AF 605
            .|
  Rat   553 TF 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 72/192 (38%)
TM helix 1 118..144 CDD:320189 12/26 (46%)
TM helix 2 151..177 CDD:320189 10/25 (40%)
TM helix 3 189..219 CDD:320189 13/29 (45%)
TM helix 4 232..255 CDD:320189 6/22 (27%)
TM helix 5 272..297 CDD:320189 7/25 (28%)
7tm_GPCRs <533..605 CDD:475119 25/75 (33%)
TM helix 6 539..561 CDD:320189 9/21 (43%)
TM helix 7 573..598 CDD:320189 9/28 (32%)
Chrm3NP_036659.2 7tmA_mAChR_M3 65..>269 CDD:320426 75/206 (36%)
TM helix 1 69..95 CDD:320426 12/25 (48%)
TM helix 2 102..129 CDD:320426 10/26 (38%)
TM helix 3 140..170 CDD:320426 13/29 (45%)
TM helix 4 182..205 CDD:320426 7/23 (30%)
TM helix 5 227..256 CDD:320426 9/28 (32%)
Basolateral sorting signal. /evidence=ECO:0000250 274..280 3/5 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..356 11/55 (20%)
7tm_GPCRs <483..563 CDD:475119 26/77 (34%)
TM helix 6 489..511 CDD:320426 9/21 (43%)
TM helix 7 522..547 CDD:320426 9/24 (38%)

Return to query results.
Submit another query.