DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrR and tyra-3

DIOPT Version :9

Sequence 1:NP_001287381.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_001024805.1 Gene:tyra-3 / 187427 WormBaseID:WBGene00006475 Length:592 Species:Caenorhabditis elegans


Alignment Length:555 Identity:164/555 - (29%)
Similarity:257/555 - (46%) Gaps:111/555 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 ILIAVF-ATFIVVTVIGNTLVILAILTTRRLRTITNCFVMSLAVADLLVGIFVMPPAVAVHLIGS 181
            :.||:| ...|::|:.||.||:|:::..:|:||.||..:.|||.||||||:.|||.:: :.|:.:
 Worm   100 VFIALFLVMLILLTIFGNILVVLSVVVYKRMRTFTNILLTSLATADLLVGLIVMPMSL-LDLLHN 163

  Fly   182 --WQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTRPLTYSRKRRSKRLALIMILIVWLL 244
              |.||..||.:|.:.||||||||||:||.||:|||.|:|.||.|.| .||:::|..::..||.:
 Worm   164 HRWPLGRFLCRMWATSDVLLCTASILNLCVISLDRYFAITSPLKYPR-TRSRKMAAGLLTAVWAI 227

  Fly   245 ALAITCPPMLGWYEP------------GRRDLRECRYNQNEGYVIFSAMGSFFIPMAVMIYVYAR 297
            :..:..||   |..|            |..:..:|.|:.:..|.|:||:|||::|:.||::||.:
 Worm   228 SFVVCSPP---WVIPSWNLFIDNNNNTGSSEDFKCAYSPSVAYRIYSALGSFYLPLLVMLFVYFK 289

  Fly   298 ISCVIASRH-------------DNMTDISVHNKKFKRYTAADVENELSEQEQHSSVGQRQRQATS 349
            |..|.:.|.             :.:|.....|::....||:...:....|..| :.|:.......
 Worm   290 IFRVASEREALMRQSVGTCRLSNRLTKTQQKNQRNNLRTASAPHSRTRVQVNH-NCGRVNYSVRP 353

  Fly   350 RTFSNQTIAKELQDMMLSDSDNCAAMGAGGAGGGGGGASSATGGTHCQSLLAL----PSGGVGGS 410
            ..::|:............||.:|......|        .|...||.|...::|    |..|:...
 Worm   354 VEYANRVENSLKPSHERFDSTDCEDSPPNG--------DSLEAGTTCNISMSLVTNSPPNGLQKE 410

  Fly   411 MGCAKNG----CYELTRPSSLKRASTASTTITTMTS-GMGPGSSLLDAQWQSQPPGQTGQVQTHS 470
               |||.    |:.|.     ...::|.|.:...|. |:.|..|....|..:       ::|.::
 Worm   411 ---AKNSMERECHSLA-----DIVNSADTPVRKNTEVGVAPSLSKRARQCNA-------RLQPNN 460

  Fly   471 LSQPPRTHSFRHSHGERDRERLRSHHHHPHYHHQAGVTTTSTSGNTSANTNSKSLSNRITSLKKE 535
            |.|                   ::|.|:            ..:|...|...||   .::..: :|
 Worm   461 LLQ-------------------KAHEHY------------QINGPGKAVRGSK---EKMVYM-RE 490

  Fly   536 NKTTQTLSIVVGGFIACWLPFFINYLITPFL----AEHQASQMLAKALTWLGWFNSAINPFIYAF 596
            .|..:|:.|||.|||.||:||||.||:..|:    ||....::.::...|||:.||.:||.||..
 Worm   491 RKALKTIGIVVLGFIICWMPFFIMYLVEVFISDPVAESPIYRITSEFFLWLGYSNSVLNPIIYTM 555

  Fly   597 YSVDFRAAFWRLTCKRFFSAGQKPQFPTNTMSIRR 631
            |:.|||..|     :...|.| ..|....|||:::
 Worm   556 YNGDFRRCF-----RDLLSFG-CVQHHRRTMSVKK 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_001287381.1 7tm_4 127..>249 CDD:304433 59/123 (48%)
7tm_1 133..>298 CDD:278431 76/178 (43%)
tyra-3NP_001024805.1 7tmA_tyramine_R-like 101..>300 CDD:320189 84/203 (41%)
TM helix 1 102..126 CDD:320189 10/23 (43%)
TM helix 2 135..157 CDD:320189 13/21 (62%)
TM helix 3 174..196 CDD:320189 14/21 (67%)
TM helix 4 219..235 CDD:320189 2/15 (13%)
TM helix 5 265..288 CDD:320189 11/22 (50%)
7tm_GPCRs <486..564 CDD:391938 33/78 (42%)
TM helix 6 488..518 CDD:341315 17/30 (57%)
TM helix 7 532..557 CDD:341315 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6630
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D189663at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4088
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.870

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