DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrR and ser-5

DIOPT Version :10

Sequence 1:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_492273.2 Gene:ser-5 / 184572 WormBaseID:WBGene00008890 Length:454 Species:Caenorhabditis elegans


Alignment Length:499 Identity:115/499 - (23%)
Similarity:177/499 - (35%) Gaps:198/499 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 IILIAVFATFIV-VTVIGNTLVILAILTTRRLRTITNCFVMSLAVADLLVGIFVMPPAVAVHLI- 179
            ::|:.:.|..|: :|:.||.||:  ....|..||.|...|.:|.:.|.|||:.|:|.. ||:|| 
 Worm    62 LVLLCIPAVIIILLTIFGNLLVL--FFKARVGRTNTTLLVWNLGLTDFLVGVIVLPMG-AVYLIY 123

  Fly   180 GSWQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTRPLTYSRKRRSKRLALIMILIVWLL 244
            ..|..|..||.:|::.||..||.|::::|.|||||||||||||.| :...:|...:.::.|:|:.
 Worm   124 RKWIFGRFLCRLWVAADVTFCTCSVVTICVISVDRYLAVTRPLRY-KSIVTKTKVISVMTIIWIF 187

  Fly   245 ALAITCPPMLGWYEPGRRDLRECRYNQNEGYVIFSAMGSFFIPMAVMIYVYARISCVIASRHDNM 309
            :.:|.. ..:.|.:|...|...|.......::..|.:.:||:|.:|.:.:|.||           
 Worm   188 SSSILL-TTVRWEQPECYDDSLCFVGNEIRHLAHSVVFAFFLPASVTLTLYWRI----------- 240

  Fly   310 TDISVHNKKFKRYTAADVENELSEQEQHSSVGQRQRQ-ATSRTFSNQTIAKELQDMMLSDSDNCA 373
                        |..|                 |.|| |..|.|           :|:       
 Worm   241 ------------YKLA-----------------RNRQKALDRGF-----------LMI------- 258

  Fly   374 AMGAGGAGGGGGGASSATGGTHCQSLLALPSGGVGGSMGCAKNGCYELTRPSSLKRASTASTTIT 438
                                                                             
 Worm   259 ----------------------------------------------------------------- 258

  Fly   439 TMTSGMGPGSSLLDAQWQSQPPGQTGQVQTHSLSQPP--RTHSFRHSHG--ERDRERLRSHHHHP 499
                 :|...:.|                |::|||..  |.| |..::|  |..|..||:|    
 Worm   259 -----LGSNMNFL----------------TNTLSQQTTLRVH-FGKTNGMVEHQRRVLRTH---- 297

  Fly   500 HYHHQAGVTTTSTSGNTSANTNSKSLSNRITSLKKENKTTQTLSIVVGGFIACWLPFFINYLITP 564
                                                .:..:||.:|...|:.||||||..|| |.
 Worm   298 ------------------------------------ERIAKTLGVVSCSFLFCWLPFFGLYL-TN 325

  Fly   565 FLAEHQASQMLAKALTWLGWFNSAINPFIYAFYSVDFRAAFWRL 608
            :........:.....:|||:.||.:||.||:|...:|:.:.:||
 Worm   326 YKCSGCVPPIAIDVASWLGYCNSMLNPIIYSFTVKEFKRSAFRL 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 65/187 (35%)
TM helix 1 118..144 CDD:320189 8/26 (31%)
TM helix 2 151..177 CDD:320189 10/25 (40%)
TM helix 3 189..219 CDD:320189 16/29 (55%)
TM helix 4 232..255 CDD:320189 3/22 (14%)
TM helix 5 272..297 CDD:320189 6/24 (25%)
7tm_GPCRs <533..605 CDD:475119 24/71 (34%)
TM helix 6 539..561 CDD:320189 10/21 (48%)
TM helix 7 573..598 CDD:320189 10/24 (42%)
ser-5NP_492273.2 7tmA_amine_R-like 64..365 CDD:320098 113/491 (23%)
TM helix 1 64..88 CDD:320098 8/25 (32%)
TM helix 2 95..122 CDD:320098 11/27 (41%)
TM helix 3 133..163 CDD:320098 16/29 (55%)
TM helix 4 175..195 CDD:320098 3/20 (15%)
TM helix 5 214..294 CDD:320098 29/224 (13%)
TM helix 6 295..325 CDD:320098 14/70 (20%)
TM helix 7 334..359 CDD:320098 10/24 (42%)

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