DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrR and ser-4

DIOPT Version :10

Sequence 1:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_497452.1 Gene:ser-4 / 175322 WormBaseID:WBGene00004779 Length:445 Species:Caenorhabditis elegans


Alignment Length:566 Identity:160/566 - (28%)
Similarity:226/566 - (39%) Gaps:176/566 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LTEPGPTAPVTTFNYYNESAAAAEWAHFYD---------------LVLSWQGIILIAVFATFIVV 129
            ||....:.|.|..      :|.|...|..|               ||   |.:||.:|....|:.
 Worm     9 LTASPSSQPATLL------SAVARGTHLVDQFPAHAEIFSDIERPLV---QTVILASVLLVLILS 64

  Fly   130 TVIGNTLVILAILTTRRLRTITNCF-VMSLAVADLLVGIFVMPPAVAVHLIGSWQLGWVLCDIWI 193
            ..|||..|||||:..|.||.....: :.||||||||||:.|.|......:.|:|.||.|:||.||
 Worm    65 CFIGNLFVILAIIMERDLRGRPQYYLIFSLAVADLLVGMIVTPLGAWFTVTGTWNLGVVVCDFWI 129

  Fly   194 SLDVLLCTASILSLCAISVDRYLAVTRPLTYSRKRRSKRLALIMILIVWLLALAITCPPMLGWYE 258
            |:|||:||||||.|.||::|||.::| .:.|.:.|..||:.| |:.::|..:|.|:..|..||.:
 Worm   130 SVDVLVCTASILHLVAIALDRYWSIT-DICYVQNRTPKRITL-MLAVIWFTSLLISLAPFAGWKD 192

  Fly   259 PGRRD--LRE--CRYNQNEGYVIFSAMGSFFIPMAVMIYVYARISCVIASRHDNMTDISVHNKKF 319
            .|..|  |:.  |..:|...|.:||...:|:||:..:|.||.:|             :....|:|
 Worm   193 EGFSDRVLKSHVCLISQQISYQVFSTATAFYIPLIAIICVYWKI-------------MRAAKKRF 244

  Fly   320 KRYTAADVENELSEQEQHSSVGQRQRQATSRTFSNQTIAKELQDMMLSDSDNCAAMGAGGAGGGG 384
            ||                    :|.|:...|  .......|.:.||...|..|            
 Worm   245 KR--------------------ERDRRTVIR--PPPDAIDEKKAMMPKKSKKC------------ 275

  Fly   385 GGASSATGGTHCQSLLALP----------SGGVGGSMGCAKNGCYELTRPSSLKRASTASTTITT 439
                            .||          :||.||                              
 Worm   276 ----------------PLPPAVVISDIQANGGTGG------------------------------ 294

  Fly   440 MTSGMGPGSSLLDAQWQSQPPGQTGQVQTHSLSQPPRTHSFRHSHGERDRERLRSHHHHPHYHHQ 504
                                       :|:|:..|||.:....|..|.:|...::       :|.
 Worm   295 ---------------------------KTNSIKNPPRHNESSSSASEEERTMTQT-------NHA 325

  Fly   505 AGVTTTSTSGNTSANTNSK-------SLSNRITSLKKENKTTQTLSIVVGGFIACWLPFFINYLI 562
            .|..||..:.....|..||       ..:.....:|:|.|..:||:|:.|.|:|||.|||:..:.
 Worm   326 PGDVTTQETKIDEENGRSKPGIVKRRRRTKESNEMKRERKAWRTLAIITGTFVACWTPFFLVSIY 390

  Fly   563 TPFLAEHQASQMLAKALTWLGWFNSAINPFIYAFYSVDFRAAFWRL 608
            .| :...|.|.:|.:...|||:.|||:||.||..:|.||||||.|:
 Worm   391 RP-ICGCQISPVLEQVTLWLGYLNSALNPIIYTVFSQDFRAAFKRI 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 80/190 (42%)
TM helix 1 118..144 CDD:320189 12/25 (48%)
TM helix 2 151..177 CDD:320189 12/26 (46%)
TM helix 3 189..219 CDD:320189 20/29 (69%)
TM helix 4 232..255 CDD:320189 7/22 (32%)
TM helix 5 272..297 CDD:320189 9/24 (38%)
7tm_GPCRs <533..605 CDD:475119 33/71 (46%)
TM helix 6 539..561 CDD:320189 11/21 (52%)
TM helix 7 573..598 CDD:320189 11/24 (46%)
ser-4NP_497452.1 7tmA_5-HT1A_invertebrates 52..432 CDD:320454 146/509 (29%)
TM helix 1 53..79 CDD:320454 12/25 (48%)
TM helix 2 87..113 CDD:320454 12/25 (48%)
TM helix 3 125..155 CDD:320454 20/29 (69%)
TM helix 4 166..188 CDD:320454 8/22 (36%)
TM helix 5 210..239 CDD:320454 10/41 (24%)
TM helix 6 361..391 CDD:320454 14/29 (48%)
TM helix 7 400..425 CDD:320454 11/24 (46%)

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