DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrR and Htr6

DIOPT Version :10

Sequence 1:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_067333.1 Gene:Htr6 / 15565 MGIID:1196627 Length:440 Species:Mus musculus


Alignment Length:548 Identity:132/548 - (24%)
Similarity:187/548 - (34%) Gaps:238/548 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 EPGPTAPVTTFNYYNESAAA-----------AEWAHFYDLVLSWQGIILIAVFATFIVVTVIGNT 135
            ||||.         |.|..|           :.|              :.|.....||:|...|:
Mouse     4 EPGPV---------NSSTPAWGPGPPPAPGGSGW--------------VAAALCVVIVLTAAANS 45

  Fly   136 LVILAILTTRRLRTITNCFVMSLAVADLLVGIFVMPPAVAVHLIGSWQLGWVLCDIWISLDVLLC 200
            |:|..|.|...||..:|.|::||..:||:||:.|||||:...|.|.|.|...||.:|.:.||:.|
Mouse    46 LLIALICTQPALRNTSNFFLVSLFTSDLMVGLVVMPPAMLNALYGRWVLARGLCLLWTAFDVMCC 110

  Fly   201 TASILSLCAISVDRYLAVTRPLTYSRKRRSKRLALIMILIVW-LLALAITCPPMLGWYEPGRRDL 264
            :||||:||.||:||||.:..||.|..:..:.| ||.:||..| |.|||...|.:|||:|.|:...
Mouse   111 SASILNLCLISLDRYLLILSPLRYKLRMTAPR-ALALILGAWSLAALASFLPLLLGWHELGKART 174

  Fly   265 R---ECRYNQNEGYVIFSAMGSFFIPMAVMIYVYARISCVIASRHDNMTDISVHNKKFKRYTAAD 326
            .   :||...:..||:.::..:||:|...:.:.|.||  ::|:|                     
Mouse   175 SAPGQCRLLASLPYVLVASGVTFFLPSGAICFTYCRI--LLAAR--------------------- 216

  Fly   327 VENELSEQEQHSSVGQRQRQATSRTFSNQTIAKELQDMMLSDSDNCAAMGAGGAGGGGGGASSAT 391
                              :||..                                     .:|.|
Mouse   217 ------------------KQAVQ-------------------------------------VASLT 226

  Fly   392 GGTHCQSLLALPSGGVGGSMGCAKNGCYELTRPSSLKRASTASTTITTMTSGMGPGSSLLDAQWQ 456
            .||                                    :||...:.|:                
Mouse   227 TGT------------------------------------ATAGQALETL---------------- 239

  Fly   457 SQPPGQTGQVQTHSLSQPPRTHSFRHSHGERDRERLRSHHHHPHYHHQAGVTTTSTSGNTSANTN 521
                            |.|||.  |......|..||.:.|.                        
Mouse   240 ----------------QVPRTP--RPGMESADSRRLTTKHS------------------------ 262

  Fly   522 SKSLSNRITSLKKENKTTQTLSIVVGGFIACWLPFFINYL-------ITPFLAEHQASQMLAKAL 579
                       :|..|.:.||.|::..|...|||||:..:       |:|.|.:         .|
Mouse   263 -----------RKALKASLTLGILLSMFFVTWLPFFVASIAQAVCDCISPGLFD---------VL 307

  Fly   580 TWLGWFNSAINPFIYAFYSVDFRAAFWR 607
            ||||:.||.:||.||..:..||:.|..|
Mouse   308 TWLGYCNSTMNPIIYPLFMRDFKRALGR 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 75/189 (40%)
TM helix 1 118..144 CDD:320189 8/25 (32%)
TM helix 2 151..177 CDD:320189 13/25 (52%)
TM helix 3 189..219 CDD:320189 17/29 (59%)
TM helix 4 232..255 CDD:320189 11/23 (48%)
TM helix 5 272..297 CDD:320189 6/24 (25%)
7tm_GPCRs <533..605 CDD:475119 27/78 (35%)
TM helix 6 539..561 CDD:320189 9/21 (43%)
TM helix 7 573..598 CDD:320189 11/24 (46%)
Htr6NP_067333.1 7tmA_5-HT6 29..333 CDD:320182 122/496 (25%)
TM helix 1 29..54 CDD:320182 8/24 (33%)
TM helix 2 61..87 CDD:320182 13/25 (52%)
TM helix 3 99..129 CDD:320182 17/29 (59%)
TM helix 4 141..164 CDD:320182 11/23 (48%)
TM helix 5 185..214 CDD:320182 8/30 (27%)
TM helix 6 263..293 CDD:320182 11/29 (38%)
TM helix 7 301..326 CDD:320182 13/33 (39%)

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