DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrR and Htr5a

DIOPT Version :10

Sequence 1:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_032340.2 Gene:Htr5a / 15563 MGIID:96283 Length:357 Species:Mus musculus


Alignment Length:514 Identity:120/514 - (23%)
Similarity:186/514 - (36%) Gaps:197/514 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 FYDLVLSWQGIILIAVFATFIVVTVIGNTLVILAILTTRRLRTITNCFVMSLAVADLLVGIFVMP 171
            |..|||:..|.:..|.|.        .|.||:..||..|....:.:..|.|:|::|:||.:.|||
Mouse    39 FRVLVLTLLGFLAAATFT--------WNLLVLATILKVRTFHRVPHNLVASMAISDVLVAVLVMP 95

  Fly   172 PAVAVHLIG-SWQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTRPLTYSRKRRSKRLAL 235
            .::...|.| .||||..||.:||:.|||.|||||.::.||::|||.::||.|.|:.:.| ||::.
Mouse    96 LSLVHELSGRRWQLGRRLCQLWIACDVLCCTASIWNVTAIALDRYWSITRHLEYTLRTR-KRVSN 159

  Fly   236 IMILIVWLLALAITCPPML-GWYEPGRRDLRECRYNQNEGYVIFSAMGSFFIPMAVMIYVYARIS 299
            :|||:.|.|:..|:..|:| ||.|.......||:.::...|.:||.:|:|::|:.|:::||    
Mouse   160 VMILLTWALSTVISLAPLLFGWGETYSEPSEECQVSREPSYTVFSTVGAFYLPLCVVLFVY---- 220

  Fly   300 CVIASRHDNMTDISVHNKKFKRYTAADVENELSEQEQHSSVGQRQRQATSRTFSNQTIAKELQDM 364
                               :|.|.||...                                    
Mouse   221 -------------------WKIYRAAKFR------------------------------------ 230

  Fly   365 MLSDSDNCAAMGAGGAGGGGGGASSATGGTHCQSLLALPSGGVGGSMGCAKNGCYELTRPSSLKR 429
                                                          ||..|              
Mouse   231 ----------------------------------------------MGSRK-------------- 235

  Fly   430 ASTASTTITTMTSGMGPGSSLLDAQWQSQPPGQTGQVQTHSLSQPPRTHSFRHSHGERDRERLRS 494
                       |:.:.|....::.:              ::...|....:.||:           
Mouse   236 -----------TNSVSPVPEAVEVK--------------NATQHPQMVFTVRHA----------- 264

  Fly   495 HHHHPHYHHQAGVTTTSTSGNTSANTNSKSLSNRITSLKKENKTTQTLSIVVGGFIACWLPFFIN 559
                        ..|..|.|:|...             :||.:....:.|::|.|:.||.|||:.
Mouse   265 ------------TVTFQTEGDTWRE-------------QKEQRAALMVGILIGVFVLCWFPFFVT 304

  Fly   560 YLITPFLAEHQASQMLAKALTWLGWFNSAINPFIYAFYSVDFRAAFWRLTCKRFFSAGQ 618
            .||:| |.......:......|||:.||..||.||..::..:.:||     |.|||..|
Mouse   305 ELISP-LCSWDVPAIWKSIFLWLGYSNSFFNPLIYTAFNRSYSSAF-----KVFFSKQQ 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 69/187 (37%)
TM helix 1 118..144 CDD:320189 7/25 (28%)
TM helix 2 151..177 CDD:320189 9/25 (36%)
TM helix 3 189..219 CDD:320189 16/29 (55%)
TM helix 4 232..255 CDD:320189 9/23 (39%)
TM helix 5 272..297 CDD:320189 9/24 (38%)
7tm_GPCRs <533..605 CDD:475119 23/71 (32%)
TM helix 6 539..561 CDD:320189 8/21 (38%)
TM helix 7 573..598 CDD:320189 9/24 (38%)
Htr5aNP_032340.2 7tm_GPCRs 41..349 CDD:475119 112/497 (23%)
TM helix 1 43..67 CDD:410628 9/31 (29%)
TM helix 2 76..98 CDD:410628 9/21 (43%)
TM helix 3 115..137 CDD:410628 12/21 (57%)
TM helix 4 160..176 CDD:410628 6/15 (40%)
TM helix 5 198..221 CDD:410628 9/45 (20%)
TM helix 6 284..306 CDD:410628 8/21 (38%)
TM helix 7 317..342 CDD:410628 9/24 (38%)

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