DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrR and Htr4

DIOPT Version :10

Sequence 1:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_032339.2 Gene:Htr4 / 15562 MGIID:109246 Length:388 Species:Mus musculus


Alignment Length:538 Identity:133/538 - (24%)
Similarity:195/538 - (36%) Gaps:223/538 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SWQGIILIAVFATFIVVTVIGNTLVILAILTTRRLRTI-TNCFVMSLAVADLLVGIFVMPPAVAV 176
            |.:.::|:...|..|::.::||.||::|:...|:||.| ||.|::|||.|||||.:.|||.. |:
Mouse    16 SVEKVVLLTFLAVVILMAILGNLLVMVAVCRDRQLRKIKTNYFIVSLAFADLLVSVLVMPFG-AI 79

  Fly   177 HLIGS-WQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAV-TRPLTYSRKRRSKRLALIMIL 239
            .|:.. |..|.:.|.:..||||||.||||..||.||:|||.|: .:||.|..|....|:|| |:.
Mouse    80 ELVQDIWAYGEMFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIAL-MLG 143

  Fly   240 IVWLLALAIT-CPPMLGWYEPGRRDLRE------------CRYNQNEGYVIFSAMGSFFIPMAVM 291
            ..|:|.:.|: .|.|.||...|..|:.|            |.:..|:.|.|..::.:|:||..:|
Mouse   144 GCWVLPMFISFLPIMQGWNNIGIVDVIEKRKFSHNSNSTWCVFMVNKPYAITCSVVAFYIPFLLM 208

  Fly   292 IYVYARISCVIASRHDNMTDISVHNKKFKRYTAADVENELSEQEQHSSVGQRQRQATSRTFSNQT 356
            :..|.||                                                        ..
Mouse   209 VLAYYRI--------------------------------------------------------YV 217

  Fly   357 IAKELQDMMLSDSDNCAAMGAGGAGGGGGGASSATGGTHCQSLLALPSGGVGGSMGCAKNGCYEL 421
            .|||                                  |.|.:                      
Mouse   218 TAKE----------------------------------HAQQI---------------------- 226

  Fly   422 TRPSSLKRASTASTTITTMTSGMGPGSSLLDAQWQSQPPGQTGQVQTHSLSQPPRTHSFRHSHGE 486
               ..|:||...|                     :|:|             ||...||   :|  
Mouse   227 ---QMLQRAGATS---------------------ESRP-------------QPADQHS---TH-- 249

  Fly   487 RDRERLRSHHHHPHYHHQAGVTTTSTSGNTSANTNSKSLSNRITSLKKENKTTQTLSIVVGGFIA 551
                |:|:                                        |.|..:||.:::|.|..
Mouse   250 ----RMRT----------------------------------------ETKAAKTLCVIMGCFCF 270

  Fly   552 CWLPFFINYLITPFLAEHQASQMLAKALTWLGWFNSAINPFIYAFYSVDFRAAFWRLTC------ 610
            ||.|||:..::.||: ::...:.:..|..|||:.||.:|||:|||.:..||.||..:.|      
Mouse   271 CWAPFFVTNIVDPFI-DYTVPEQVWTAFLWLGYINSGLNPFLYAFLNKSFRRAFLIILCCDDERY 334

  Fly   611 KRFFSAGQKPQFPTNTMS 628
            ||....||.....|.|::
Mouse   335 KRPPILGQTVPCSTTTIN 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 78/201 (39%)
TM helix 1 118..144 CDD:320189 8/25 (32%)
TM helix 2 151..177 CDD:320189 15/25 (60%)
TM helix 3 189..219 CDD:320189 19/30 (63%)
TM helix 4 232..255 CDD:320189 9/23 (39%)
TM helix 5 272..297 CDD:320189 8/24 (33%)
7tm_GPCRs <533..605 CDD:475119 27/71 (38%)
TM helix 6 539..561 CDD:320189 9/21 (43%)
TM helix 7 573..598 CDD:320189 12/24 (50%)
Htr4NP_032339.2 7tmA_5-HT4 20..323 CDD:320184 123/503 (24%)
TM helix 1 21..47 CDD:320184 8/25 (32%)
TM helix 2 55..81 CDD:320184 15/26 (58%)
TM helix 3 93..123 CDD:320184 19/29 (66%)
TM helix 4 136..159 CDD:320184 8/23 (35%)
TM helix 5 189..218 CDD:320184 10/84 (12%)
TM helix 6 252..282 CDD:320184 12/69 (17%)
TM helix 7 291..316 CDD:320184 12/24 (50%)

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