DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TyrR and Adra2c

DIOPT Version :9

Sequence 1:NP_001287381.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster
Sequence 2:NP_031444.2 Gene:Adra2c / 11553 MGIID:87936 Length:458 Species:Mus musculus


Alignment Length:569 Identity:168/569 - (29%)
Similarity:241/569 - (42%) Gaps:139/569 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 AGNGTGGGGVGGVGGGYPSGPNGTDAVALTEPGPTAPVTTFNYYNESAAAAEWAHFYDLVLSWQG 116
            |..|..|...|..|.|..:..:|||.|    |.|       ..|:..|.|.              
Mouse    14 AAEGPNGSDAGEWGSGGGANASGTDWV----PPP-------GQYSAGAVAG-------------- 53

  Fly   117 IILIAVFATFIVVTVIGNTLVILAILTTRRLRTITNCFVMSLAVADLLVGIFVMPPAVAVHLIGS 181
              |.||....||.||:||.||::|:||:|.||...|.|::|||.||:||...|||.::|..|:..
Mouse    54 --LAAVVGFLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAY 116

  Fly   182 WQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTRPLTYSRKRRSKRLALIMILIVWLLAL 246
            |..|.|.|.::::||||.||:||:.|||||:|||.:||:.:.|:.||..:|:. ..|:.|||::.
Mouse   117 WYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVK-ATIVAVWLISA 180

  Fly   247 AITCPPMLGWY-EPGRRDLRECRYNQNEGYVIFSAMGSFFIPMAVMIYVYARISCVIASRHDNMT 310
            .|:.||::.:| .|......:|..|....|::.|.:||||.|..:|..|||||..|...|...::
Mouse   181 VISFPPLVSFYRRPDGAAYPQCGLNDETWYILSSCIGSFFAPCLIMGLVYARIYRVAKLRTRTLS 245

  Fly   311 DISVHNKKFKRYTAA-DVENELSEQEQHSSVGQRQRQATSRTFSNQTIAKELQDMMLSDSDNCAA 374
            :        ||..|. |..:..:|.....:.|:....|..||        |::....|.::....
Mouse   246 E--------KRGPAGPDGASPTTENGLGKAAGENGHCAPPRT--------EVEPDESSAAERRRR 294

  Fly   375 MGA---GG--AGGGGGGASSATGGTHCQSLLALPSGGVGGSMGCAKNGCYELTRPSSLKRASTAS 434
            .||   ||  ..|..|...||.|          |..|:....|                 |.|||
Mouse   295 RGALRRGGRRREGAEGDTGSADG----------PGPGLAAEQG-----------------ARTAS 332

  Fly   435 TTITTMTSGMGPGSSLLDAQWQSQPPGQTGQVQTHSLSQPPRTHSFRHSHGERDRERLRSHHHHP 499
            .:       .|||..|..|.                    .|:..|..|.    |.|.||     
Mouse   333 RS-------PGPGGRLSRAS--------------------SRSVEFFLSR----RRRARS----- 361

  Fly   500 HYHHQAGVTTTSTSGNTSANTNSKSLSNRITSLKKENKTTQTLSIVVGGFIACWLPFFINYLITP 564
                                    |:..|..:..:|.:.|..|::|:|.|:.||.|||.:|.:..
Mouse   362 ------------------------SVCRRKVAQAREKRFTFVLAVVMGVFVLCWFPFFFSYSLYG 402

  Fly   565 FLAEH-QASQMLAKALTWLGWFNSAINPFIYAFYSVDFRAAFWRLTCKR 612
            ...|. |..:.|.|...|:|:.||::||.||..::.|||.:|..:..:|
Mouse   403 ICREACQLPEPLFKFFFWIGYCNSSLNPVIYTVFNQDFRRSFKHILFRR 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRNP_001287381.1 7tm_4 127..>249 CDD:304433 58/121 (48%)
7tm_1 133..>298 CDD:278431 72/165 (44%)
Adra2cNP_031444.2 7tmA_alpha2C_AR 60..444 CDD:320446 148/487 (30%)
TM helix 2 86..112 CDD:320446 13/25 (52%)
TM helix 3 124..154 CDD:320446 17/29 (59%)
TM helix 4 166..189 CDD:320446 8/23 (35%)
TM helix 5 207..236 CDD:320446 13/28 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..343 31/147 (21%)
TM helix 6 371..401 CDD:320446 12/29 (41%)
TM helix 7 412..437 CDD:320446 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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